LOCUS       AP027757                2138 bp    DNA     circular BCT 03-NOV-2023
DEFINITION  Escherichia coli 2017.02.04CC plasmid p2017.02.04CC_3 DNA, complete
            sequence.
ACCESSION   AP027757
VERSION     AP027757.1
DBLINK      BioProject: PRJDB14867
            BioSample: SAMD00562587
KEYWORDS    .
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1
  AUTHORS   Hoang,H.T.T., Yamamoto,M., Calvopina,M., Bastidas-Caldes,C.,
            Khong,D.T., Nguyen,T.N. and Yamamoto,Y.
  TITLE     Comparative genome analysis of colistin-resistant Escherichia coli
            strains possessing mcr isolated in Ecuador and Vietnam
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2138)
  AUTHORS   Yamamoto,Y. and Hoang,H.T.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAR-2023) Contact:Yoshimasa Yamamoto The United
            Graduate School of Drug Discovery and Medical Information Sciences,
            Gifu University; Yanagido 1-1, Gifu 501-1194, Japan
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method       :: Unicycler v. 0.4.8
            Genome Coverage       :: 146x
            Sequencing Technology :: MGI DNBSEQ-G400RS; ONT MinION Mk1c
            ##Genome-Assembly-Data-END##
            Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
FEATURES             Location/Qualifiers
     source          1..2138
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="2017.02.04CC"
                     /isolation_source="feces"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /plasmid="p2017.02.04CC_3"
                     /geo_loc_name="Viet Nam:Thai Binh"
                     /collection_date="2017"
     gene            18..743
                     /locus_tag="VEE51_43940"
     CDS             18..743
                     /locus_tag="VEE51_43940"
                     /inference="COORDINATES: ab initio
                     prediction:MetaGeneAnnotator"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="BEC30147.1"
                     /translation="MWQARFYQSLPKIVADYPDARWMFLTLTVRNCAIEDLGDTLTAMN
                     AAFQRMKVRKEFKSVQGWIRTTEVTRGRDGSAHPHFHTLMMVPPGMLNGHDYVKHYRWV
                     ELWRDCLRVDYDPNVDVRAVKPRKPKDGQTLACATAELVRGAVAETLKYSTKPADMVAD
                     PDWFLELTRQTHKRRFVATGGALKDVLKLEQETDQDMVIGDDISDGEDDGSRLAFGWDS
                     TPRKYVRLPERDKFKSDPD"
                     /name="hypothetical protein"
     Typing          complement(464..654)
                     /name="ColpVC"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="84.375"
                     /coverage="98.0"
                     /evalue="1.4200000000000001e-44"
ORIGIN
        1 agtggaggcg ttccctgatg tggcaagccc gtttttatca gtctctgccg aaaatcgtcg
       61 ctgattaccc tgatgcccgc tggatgttcc tcacgctcac cgttcgcaac tgtgcgatcg
      121 aggatctcgg ggacacgctt actgccatga atgccgcatt ccagcgcatg aaggttcgca
      181 aggaatttaa atccgtacag ggatggattc gcaccacaga agttacccgc ggtcgtgatg
      241 gctctgcaca cccccacttt cacaccctga tgatggttcc tcctgggatg ctgaacggtc
      301 atgactacgt taagcactac cgctgggttg aactctggcg tgactgcctg cgcgttgatt
      361 acgatcctaa tgttgatgtt cgggcagtga aaccccgcaa gcctaaagat ggccagactc
      421 tggcatgtgc cactgctgaa ctggtgcgcg gtgccgttgc tgaaaccctg aaatattcga
      481 caaagccggc tgatatggtt gccgacccgg actggttctt agagctgacc cggcagacgc
      541 ataaacgccg ttttgttgcg accggtggcg ctctgaaaga cgttctgaaa ctggagcagg
      601 aaacggatca ggacatggtg atcggggatg atatttccga tggtgaagac gatggttcac
      661 gcctcgcctt tggctgggat tcgacgccaa gaaaatacgt ccgtttgcct gaacgcgata
      721 agtttaaatc agatcctgat tagggtgtcg gggcctgccc tgaccaggtt gtttttggat
      781 gccgctgcgt gtggcggtac tccaaaaaca catcttgtcc ggtacacaga tttcctttgg
      841 cattccttcg ggtttccctg agatttccac tctgcataca tacacgcata cacgaataat
      901 caacggcaga attcgggcag gatatgtaaa gtgggaccac tttacgcctg ccttattcgc
      961 actctgctca atggaatatt aaatctgaca gcgttcgccg tcgtcgaatc gtcaacttct
     1021 aaatcggggg atccctttag ggttccgatt tagtggttgt acgactgcac ccctcatacc
     1081 cttgtgatgg gtgatggttc acatggtgag ccatcgccct gtaaagccgc tttttacccc
     1141 cttcaaggcg ttgcctgtgg ggtaggtgcg taagccctgc cctacaggtg atgccgtggg
     1201 ggtattttcg ttttgctcgg tatgccttat tcgtttaaat ccgccatcag gagtatgcgg
     1261 ggtaaagtcg tgcggccgcg atgaggaacg gggattgccc ccgcagctct gcgaggaggc
     1321 acacgccgtt cggaatcggg gtccactctg tttaatagtg gactcttgtt gcgatttgca
     1381 acggaaacag ccgcgtgcag tgaatgtaat actgcacgtt tgtctcaatc tgacatttct
     1441 cagggggggg cgatttaacg tggtttgctt aatttttgag cttacgaatg cttgagtgtt
     1501 tgagtgcctg aatgctgctt ttgggggttg gtttttcggc cctgaaaggg gcgaaatcct
     1561 tgtatttata cttaagggat aactctagga ttcaaattcg cttccagccc ttgtgccgca
     1621 aggcctgaga gccaatttgc tcgaaaatgg ttttgtgagt atgatttctg acaggtgatc
     1681 gtgtccgcga actaattttt gattacttgg ggtggttccc aagaccttac ttactgacac
     1741 gatgatatga gaaacccctg caagtgctac caacacttca ggggcgcgat cacctggcta
     1801 aatacggttt gaaatcgact cgcaacaggt gatacggaaa tgataacaca cccttccagc
     1861 gcctgcccat attggagcag gtgctatgca gaatcctaag ctaaagaacc ttactgacta
     1921 cagtcccgac gataagccgt gggacgttca caagtcgcaa tctgatgatg ttggcggtat
     1981 ctatctgcgt gcagctgaat ttgaggcgta tgcggctcgt atgcgcgatt gtggcggctt
     2041 gctgcgtttt ggctggtcta cccttaaaga caccggagaa acgcgtttac ggcttcgtga
     2101 ggcgcatttc tgccgcgttc gtcactgccc tgtctgcc
//
