LOCUS       AP027756                2473 bp    DNA     circular BCT 03-NOV-2023
DEFINITION  Escherichia coli 2017.02.04CC plasmid p2017.02.04CC_2 DNA, complete
            sequence.
ACCESSION   AP027756
VERSION     AP027756.1
DBLINK      BioProject: PRJDB14867
            BioSample: SAMD00562587
KEYWORDS    .
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1
  AUTHORS   Hoang,H.T.T., Yamamoto,M., Calvopina,M., Bastidas-Caldes,C.,
            Khong,D.T., Nguyen,T.N. and Yamamoto,Y.
  TITLE     Comparative genome analysis of colistin-resistant Escherichia coli
            strains possessing mcr isolated in Ecuador and Vietnam
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2473)
  AUTHORS   Yamamoto,Y. and Hoang,H.T.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAR-2023) Contact:Yoshimasa Yamamoto The United
            Graduate School of Drug Discovery and Medical Information Sciences,
            Gifu University; Yanagido 1-1, Gifu 501-1194, Japan
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method       :: Unicycler v. 0.4.8
            Genome Coverage       :: 146x
            Sequencing Technology :: MGI DNBSEQ-G400RS; ONT MinION Mk1c
            ##Genome-Assembly-Data-END##
            Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
FEATURES             Location/Qualifiers
     source          1..2473
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="2017.02.04CC"
                     /isolation_source="feces"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /plasmid="p2017.02.04CC_2"
                     /geo_loc_name="Viet Nam:Thai Binh"
                     /collection_date="2017"
     gene            complement(790..1320)
                     /locus_tag="VEE51_43920"
     CDS             complement(790..1320)
                     /locus_tag="VEE51_43920"
                     /inference="COORDINATES: ab initio
                     prediction:MetaGeneAnnotator"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="BEC30145.1"
                     /translation="MSGFIPFVGSKYENSIYGLKLLVLGLSHYGDADDNYPDFTKDVIA
                     ENAYTTGNRFFTILTNVLRLSRESITDDQRKITWENIAFYNYIQQIVGEKGRISPTKEM
                     WDSAREPFLSVIKQLQPNVILVLGTELWDHLPEVDGVEWCWIRHPSSSNFSYDQAFNNL
                     KKSIGMENIVYLP"
                     /name="hypothetical protein"
     gene            complement(2008..2313)
                     /locus_tag="VEE51_43930"
     CDS             complement(2008..2313)
                     /locus_tag="VEE51_43930"
                     /inference="COORDINATES: ab initio
                     prediction:MetaGeneAnnotator"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="BEC30146.1"
                     /translation="MREKKQAERPETVEEMLKRLGFKSLKETLQKPIFLINFGAVKNMQ
                     SVVDEAFDEITKAKQGWYWQKVVDCLNENTNANVKLESIKTMYKRAKKKREDEESE"
                     /name="hypothetical protein"
ORIGIN
        1 cgtatttatc cagcaggtgc tttccttcgc tgaccgtact catctgtcgg gtgagctcca
       61 ggttccatgt ggtcagtttc attcgcagct cggtgtcgat acgtctcacg tcatcgagaa
      121 tgttctctgt cagggttttc ctgggggata aactcagcgc ctgagccagc aattcccgcg
      181 ctttgttggt cagggttttg ttttcccgtt cggctatctg actcagcttt tccttgaggt
      241 catcctcgat tctgaagctc agggttgttg attttttgct ctcaaccata aatcgtcgat
      301 tttcctcgct gtctgaaaac gttgacgcac agggctctaa ggcctgttcc acgctaaaaa
      361 tccaggacgt tctcaatacg gcctgaaaac caaaaaacta aggcacgacg gcgactgtat
      421 acaaacgggg acaaagtggg gacatttttt ccgtttatct acagtcgcgt gctcagggga
      481 taccctgata ccccgaagcc tctacgagtc ttttttctga cgcgctgcgc ttgtccaacg
      541 ctttacaccc ggataaaaaa tttatccgcc cgttcaccgt tttcgggagg gacttttcat
      601 cgggtttcaa cgaccaggca gagaatcggg tcgctaatcg gttgccatgc acctgagtgc
      661 ataacgattc atgcgcgtaa aactcacaga agctattctg agcggttttc gggggggaag
      721 gtgtgttgtt ttgaggctca gacgggaaaa tcgcgcacag gccgtttcag cggtgcgcgt
      781 aatgcgacgt tatggtaaat aaacgatatt ttccatgcct attgattttt tgaggttatt
      841 aaatgcttga tcatatgaga aattactaga gcttggatgt ctaatccaac accattcaac
      901 accatcaact tcaggaagat gatcccaaag ttcagtacct agaacgagga tcacatttgg
      961 ttggagttgc ttaattacac ttaggaatgg ctctcgggca ctatcccaca tttctttagt
     1021 gggagatatt cgaccttttt ctccaacaat ttgttgtatg tagttgtaga acgctatgtt
     1081 ttcccaagtt atcttccttt gatcatcagt tatgctttcc ctagacaatc gaagtacatt
     1141 agtcagtatc gtgaagaatc ggttacctgt tgtataggca ttctctgcaa taacatcctt
     1201 agtaaaatct ggatagttat catcagcatc accataatgc gacaaaccta agaccagtaa
     1261 ttttaaccca tagatactgt tctcatactt gctaccgaca aatggtatga aaccactcat
     1321 ggcatactcc tttcttcggg gtgatggttg ttttttgaac ataaaaacct aatgcccccg
     1381 tggtgggtat ataaaaaacc acggggagcg gagcgacctt cgtccagctc ttttcttgtg
     1441 tgtctcatct tgcaacggat tcgatttgtg tggggttagt gtcagacttc tcgcaatcac
     1501 actttcccgc ttactgctgc cttattcgct cattttatca ggtgcttgtt atcgtacagc
     1561 gagacggggt agagcctaac tctttcgcgg ttaagttacg ttcccaccaa tttgcctgtt
     1621 tatcctgccg gagtccgggg cgtagacctg agcgtctaag gtgcagatat gattttaatg
     1681 tcgttgaatg gtattaagct ggtagtgaca tggctagcca gccctgctaa gatttgattg
     1741 cgacgtctaa tccagcaggt atctgcacga attagagtac cgaagccctg tgattctgtc
     1801 acggggcttt tgtacattta gagatataaa aattacaact aaaggcatcg ctattagtaa
     1861 cttacgactt catagtcgca ggttacagca tgaactccct tcaaatcata atgttaaaat
     1921 agcaacgctc accgcagtct catgaccgaa cgaagtgagc gaatgagcga ggaagcgtca
     1981 tttcatcgga tgcttgcgtg tgcacggtca ctctgactcc tcatcttccc gttttttctt
     2041 tgcccgtttg tacatggttt taatggactc gagctttacg ttggcgttcg tattctcatt
     2101 cagacagtcc acgacctttt gccagtacca tccctgcttc gcctttgtga tttcatcaaa
     2161 ggcttcatcc acgacggact gcatgttttt gaccgcccca aagttaataa ggaaaatggg
     2221 tttctgaagc gtctccttca gacttttgaa gcctaaccgc ttaagcattt cctcgaccgt
     2281 ctctggcctt tcagcctgtt ttttctcacg cattgggttt acctcagata cacaagcagg
     2341 gcgataacca cggcattacc cgccagggcc gtcaggaaga aagcggcggt ccaccggacc
     2401 atgcttcgct ccgtgcgccg ggttctggct ttttcctcct ccagttcgct tctcagacgt
     2461 ttaatctcgg tcc
//
