LOCUS       AP026649                2989 bp    DNA     circular BCT 11-AUG-2022
DEFINITION  Enterococcus faecium AA610 plasmid pAA610_7 DNA, complete sequence.
ACCESSION   AP026649
VERSION     AP026649.1
DBLINK      BioProject: PRJDB13429
            BioSample: SAMD00466813
KEYWORDS    .
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillota; Bacilli; Lactobacillales; Enterococcaceae;
            Enterococcus.
REFERENCE   1
  AUTHORS   Hashimoto,Y., Suzuki,M. and Tomita,H.
  TITLE     Analysis of enterococcal linear plasmids
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2989)
  AUTHORS   Hashimoto,Y. and Tomita,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-AUG-2022) Contact:Yusuke Hashimoto Gunma University,
            Bacteriology Graduate School of Medicine; 3-39-22, Showa, Maebashi,
            Gunma 371-0804, Japan
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method       :: Canu v. 2.1.1
            Genome Coverage       :: 50x
            Sequencing Technology :: Illumina miniseq; Nanopore MinION
            ##Genome-Assembly-Data-END##
            Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
FEATURES             Location/Qualifiers
     source          1..2989
                     /organism="Enterococcus faecium"
                     /mol_type="genomic DNA"
                     /strain="AA610"
                     /host="Homo sapiens"
                     /db_xref="taxon:1352"
                     /plasmid="pAA610_7"
                     /geo_loc_name="Japan"
                     /collection_date="2017"
     gene            1174..1458
                     /locus_tag="EfmAA610_36120"
     CDS             1174..1458
                     /locus_tag="EfmAA610_36120"
                     /inference="COORDINATES: ab initio
                     prediction:MetaGeneAnnotator"
                     /inference="similar to AA sequence:RefSeq:WP_002390111.1"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="BDP86402.1"
                     /translation="MDILVRNIDPKFVATIDKRCQELTNKTGEKWSRNKYLKVLIESDF
                     DRQLTTYKKDQFDLLLDKFIAIQTENTQILSEYVYTNNQIIEMLIGGMI"
                     /name="hypothetical protein"
     gene            1461..1877
                     /locus_tag="EfmAA610_36130"
     CDS             1461..1877
                     /locus_tag="EfmAA610_36130"
                     /inference="COORDINATES: ab initio
                     prediction:MetaGeneAnnotator"
                     /inference="similar to AA sequence:RefSeq:WP_002390085.1"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="BDP86403.1"
                     /translation="MRKTSVQKHVTLYPSHVDVLDSIIEKNPDINNYSEAIRFLCMSYE
                     PDTNTTTTSNQAKLNAMGKEISIMTEIIAEFADLYLKDTGVLIGTNSKVYQEVKEKIEA
                     KLNPSNRNRPKNHQKETSQTVTSRNFDPTNFLKR"
                     /name="hypothetical protein"
     gene            complement(2014..2733)
                     /locus_tag="EfmAA610_36140"
     CDS             complement(2014..2733)
                     /locus_tag="EfmAA610_36140"
                     /inference="COORDINATES: ab initio
                     prediction:MetaGeneAnnotator"
                     /inference="similar to AA sequence:RefSeq:WP_011117494.1"
                     /codon_start=1
                     /transl_table=11
                     /product="RepB family plasmid replication initiator
                     protein"
                     /protein_id="BDP86404.1"
                     /translation="MDEKTELTVKYQNELNLVPLKNFNAKQMDLFFALCARMKDRGLKK
                     VRFSFEELKELSDYKMTATKAFVGDLEKLYKDMLNLTYRTEDEDSIRYFVLFTGFEINK
                     TKKFVEVSVNPDLEYIINGLTAEFSRFELSAFTSLRSTYAKTLFRLLMQYRSTGYYVVR
                     IEEFRSLMDIPEYYQMGNIDQKVLNPALRELKKYFNDLKVTKIKAKKGNKIAKLEFTFS
                     SLTSDLPKISLRNWLEE"
                     /name="RepB family plasmid replication initiator protein"
     Typing          complement(2015..2733)
                     /name="rep_cluster_1763"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="100.0"
                     /coverage="100.0"
                     /evalue="0.0"
ORIGIN
        1 gcaaaatttc ccgccaaaaa atcacccact ttttaaaata aacaggttcg cgcatgatat
       61 taaactgcca atctagctcc ctatggtcgc tgtaagaagg agtgatcgct acgctctcac
      121 attttacttg cagcagtcgc ctttaggctc cttcgccaaa aataattcat tagggactcc
      181 tttgtggcgt cctgagagct cgtctaagcc gttctaagac aagattcgat aaaaactatg
      241 tccttcgttc taaagcgcct tacaggcggt cagggcaagc cctaacaacc ccaaggcaat
      301 aaaaaactta ggcttatttt tgctttttta ttgtataatt gattgtcgcc tatccgacag
      361 tcttgcgact ggaaggaggt gtgtttcgtg ttcactaact ttatttgctc ccttcttgtt
      421 gggcttttaa gcgctttgtt cagttactgg ttgaataacc gaaacaagaa gtaaaactta
      481 attaaggcga ctcagcccac aaaaaaagcc ccagagaatc cgacctctct ggggatttcg
      541 tgtgtttcgt gttcacttat ttgcaatcaa attataaaaa gaaaatattt atttcaaaaa
      601 tatcctacaa aaaagtctaa aatccgtaat tatttcttat atgcaacatt tacaaataaa
      661 gtcgctctga gagctcgtat ttttcgattt aagacgtttt atttagtttt tggtgtattt
      721 cattggtcca agctaaaaaa ctcttagaag cgattttaga gccatttaaa cccacttaat
      781 tatattctcc atgaaattcg ctccatgcgt caaaagctgc gtctgaaatt ccgccgtctt
      841 cgttcactag ttgcattaat ttttccaacg atcgttttct ttcgggtgtc atatttttat
      901 attccaacaa tttttcgtct gttaaatttg gttatcgatt acacgtgcag cactcccccc
      961 cgaattttaa agagcataag gaaacgtgta cccactttct aaaaaaagtg ggtagatagg
     1021 ctgtgcctat cacgtttctc agaaaaaaat ttgatatcac tttttcgcca tcgtgggtag
     1081 cttatgtata gcattttggc aaaaaacagc tatacaaata tagtatttgt atggtataca
     1141 taaattatac ataattgcaa aaggagattt tttatggaca ttttagttcg gaatattgat
     1201 ccaaagtttg ttgcaacaat agacaaacgt tgccaagaac tcacgaataa aacaggagaa
     1261 aaatggagtc gaaataaata tctaaaagtt ttaatcgaaa gtgattttga ccgtcaactt
     1321 acgacttaca aaaaagacca attcgattta ttgctcgata aatttattgc tatccaaaca
     1381 gaaaatactc aaatattaag cgagtatgtc tacacaaata atcaaatcat tgaaatgctt
     1441 atcggaggaa tgatataacc atgagaaaaa cttctgtcca aaaacatgtt actttgtacc
     1501 ctagtcatgt tgacgtttta gattccatca tcgaaaaaaa tccagatatc aataactact
     1561 cggaagccat tcgcttttta tgtatgagtt atgaacccga taccaacacg accactacca
     1621 gcaatcaggc aaaactaaat gctatgggaa aagaaatttc catcatgact gaaatcatcg
     1681 cagaatttgc tgatttatat ctaaaagata caggcgttct tattggcaca aattctaaag
     1741 tatatcaaga agtgaaagaa aaaatcgaag ctaaactaaa tccatcaaat cgaaatcgac
     1801 caaagaatca tcaaaaagaa accagtcaaa cagtcacttc tagaaatttc gacccaacaa
     1861 attttctaaa acgataaaaa acagatagga gttattccta tctgtttttt atttagaagc
     1921 cccatacaat atgctagaat gtactagcaa tcttagtcgg ttgtaaggga cttgtctact
     1981 tgcttaatgt aaggggggcg agttcttttt tatttattct tctaaccagt tacgcagaga
     2041 aatctttggc aaatctgacg ttaggcttga aaaagtaaat tctaatttgg cgattttatt
     2101 gccctttttt gcttttattt ttgtgacttt aagatcattg aagtattttt ttagttctcg
     2161 taatgcagga tttaatactt tttgatcaat gttacccatt tgatagtatt ctgggatatc
     2221 cattaagctc ctaaactctt caatacgaac tacataataa ccagtagaac ggtactgcat
     2281 aagcagtcgg aatagagttt ttgcatacgt agaacgcaac gacgtgaaag cagataattc
     2341 aaatctacta aattcagctg ttaaaccatt aataatatat tctaggtccg gattaacact
     2401 gacttcaaca aacttttttg ttttattgat ttcaaaacca gtaaacaaaa caaagtagcg
     2461 aatagaatcc tcatcttcag tacggtaagt aagattaagc atatctttat agagcttttc
     2521 taaatcaccg acaaaggctt ttgtagcagt catcttataa tcacttaact cttttaattc
     2581 ctcgaaagaa aatctaactt ttttcaaacc acgatctttc atacgagcgc ataatgcaaa
     2641 aaataaatcc atctgcttag cattgaaatt tttcagcggt actaaattca attcattttg
     2701 atatttgact gttaattccg ttttttcatc cattcctttc ttcccccctt acaaataaat
     2761 aataaccttt aacaaccaac tcgtaaatag gttggttgtt attatacaaa aggtaaaaag
     2821 ttgttagtac tcagataaaa agttgttagt actcagataa aaagttgtta gtactcagat
     2881 aaaaagttgt tagtaccctt ctgtatccgt tgggagagta aggctcaact gccccctaaa
     2941 aagggttcta aaaaatcttt aaaaaataaa taaaataaac gcgcgcgcg
//
