LOCUS       AP026625                3891 bp    DNA     circular BCT 11-AUG-2022
DEFINITION  Enterococcus faecium AA96 plasmid pAA96_7 DNA, complete sequence.
ACCESSION   AP026625
VERSION     AP026625.1
DBLINK      BioProject: PRJDB13429
            BioSample: SAMD00466810
KEYWORDS    .
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillota; Bacilli; Lactobacillales; Enterococcaceae;
            Enterococcus.
REFERENCE   1
  AUTHORS   Hashimoto,Y., Suzuki,M. and Tomita,H.
  TITLE     Analysis of enterococcal linear plasmids
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3891)
  AUTHORS   Hashimoto,Y. and Tomita,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-AUG-2022) Contact:Yusuke Hashimoto Gunma University,
            Bacteriology Graduate School of Medicine; 3-39-22, Showa, Maebashi,
            Gunma 371-0804, Japan
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method       :: Canu v. 2.1.1
            Genome Coverage       :: 50x
            Sequencing Technology :: Illumina miniseq; Nanopore MinION
            ##Genome-Assembly-Data-END##
            Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
FEATURES             Location/Qualifiers
     source          1..3891
                     /organism="Enterococcus faecium"
                     /mol_type="genomic DNA"
                     /strain="AA96"
                     /host="Homo sapiens"
                     /db_xref="taxon:1352"
                     /plasmid="pAA96_7"
                     /geo_loc_name="Japan"
                     /collection_date="2011"
     gene            complement(733..2139)
                     /locus_tag="EfmAA96_35500"
     CDS             complement(733..2139)
                     /locus_tag="EfmAA96_35500"
                     /inference="COORDINATES: ab initio
                     prediction:MetaGeneAnnotator"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="BDP75765.1"
                     /translation="MGFSISFKKGTKNTSISHNNRELTDSQKINDWHKHIDFTKSDENI
                     YLEQINIREKYEELFGEAVEKYNAKQKRADRKIEDYLAKVRKDKKMEPQREFIVQIGTL
                     DDFRTTRDDGSSTGISEQQAEQNRVIANKILVEYFKEFKERNPSLSVYNAVIHNDEVSP
                     HLHLNIVPVAEGYKRGVQKQPSFNKALQQQGLRADKENGRVIWNNFRNQEVESIERLMA
                     DFGWERELVGTNKIKDVHEYKEIMSEISELRQTAVKERESVSDELGYISRQREENEREK
                     ALVASERAKIEEEKKNMLNVKKEMAVIFQKDMVPLESFKRLPDGSYHLSGNDFVDLYQR
                     ATRATNAKRNADNMSEQYLQMLEQNTELNEYVAALEEERHLSGRKQLADLQVENKKLKE
                     ENRSLRQRLERLKNAFQKSITRLSIRFGLAEKDMGLSEELEVLEQEKTLFYRQNVSQRK
                     LERSENEIEW"
                     /name="hypothetical protein"
     gene            complement(2361..2723)
                     /locus_tag="EfmAA96_35510"
     CDS             complement(2361..2723)
                     /locus_tag="EfmAA96_35510"
                     /inference="COORDINATES: ab initio
                     prediction:MetaGeneAnnotator"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="BDP75766.1"
                     /translation="MGVTLADIKAQEEKLKKEQAKLRQQKKRLIEKENAEMGKALRKHF
                     GFESFADFERWLSSISDDQQHEKSVDNEWLADEKSAPSERDYPDESDGLFGVIPNKKSQ
                     MSESKFTSIFNDVNLR"
                     /name="hypothetical protein"
     gene            complement(2776..3024)
                     /locus_tag="EfmAA96_35520"
     CDS             complement(2776..3024)
                     /locus_tag="EfmAA96_35520"
                     /inference="COORDINATES: ab initio
                     prediction:MetaGeneAnnotator"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="BDP75767.1"
                     /translation="MKLDKQRLYEAVKDNCNCGGNRQLFKAMMVTVYRRLDGENAEAAV
                     ENAYFQVFGEHHSPEWDRAILDDMAEMHEKLWRALND"
                     /name="hypothetical protein"
     Typing          complement(3012..3891)
                     /name="rep_cluster_1077"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="93.537"
                     /coverage="99.0"
                     /evalue="0.0"
     Typing          complement(737..2139)
                     /name="MOBV"
                     /typing="relaxase"
                     /tool="MOB-suite"
                     /identity="98.504"
                     /coverage="100.0"
                     /evalue="0.0"
ORIGIN
        1 atgttttcca aggttttgcc agaaatacga ccatcaccaa atgccatgat tttctttaaa
       61 tttttttttt tttctcggaa agtgccattg atcaaatctt gctttttctt cgccatatgc
      121 tatactgaac cttgcagaac acaaacgttc cgcccaaaca tttaaaaaac gcattttcta
      181 aatgcacgaa aaaaaggttg cactcctctc ttgtattatg acttttgact tagacactca
      241 aagcatacaa cactaggtac ggatatgcaa cttttttttg tttaaaaccc ttataggtca
      301 agggaaaaac acatacatag gacccgattt tctgccgaaa atagttaccc tatgtatcaa
      361 gataagaaga aacatcaaaa aaagaggtcg aaatcgacct cttttttctc gtttcaaacc
      421 ccaaaactca aaaacccact tctgcataaa attcggtcaa ttgaccactg catttttaag
      481 ggaagggtca aactttgata ctttaaccgc ctgttagaaa tacggttaag tttttcccac
      541 tcattcttag tcatgcaaac ataaaaccgc accctttaaa aagggcgccc ccaaacttcg
      601 ctaacgctag gttggccaaa aaatggactg gccatttttt agcaaatgtc agcttaatag
      661 gctagtggtt tagccgtcaa ctccttatcc tcggcacaaa ccgcctccgg taccgttgac
      721 tgcacatcgt ggctaccact caatctcatt ctcagaacgc tctaatttac gctgtgagac
      781 gttttgacga taaaataagg ttttctcctg ctctaatact tctaattcct cagaaagccc
      841 catatccttt tctgcaagac caaaacggat agacaaacga gtgatcgatt tttgaaatgc
      901 gttttttaat cgctctaaac gctggcgtaa agagcgattt tcttctttca gctttttatt
      961 ttccacttgt aaatctgcta attgttttct accagacaaa tgacgctctt cttccaatgc
     1021 agctacatac tcatttaatt ctgtattttg ctcaagcatc tgtaaatatt gctcactcat
     1081 gttatcagca tttctcttgg catttgttgc tctcgtagct cgttgataca aatcaacaaa
     1141 atcattccca gataaatgat acgaaccatc aggaagcctc ttgaaacttt ctaaaggaac
     1201 catatctttt tggaaaatga ccgccatctc tttttttaca ttcagcatat ttttcttctc
     1261 ttcttcaatc ttcgctctct cagaagccac cagagccttt tctcgctcat tttcttctct
     1321 ttgcctagaa atatacccca actcatcaga aacgctctca cgctctttta cggccgtttg
     1381 acgcaattct gaaatctcgc tcatgatttc tttatattcg tgaacatctt tgattttgtt
     1441 agtaccgact aactcacgct cccaaccaaa atctgccatc aaacgttcaa ttgactcaac
     1501 ttcctgattc ctaaaattat tccaaatcac tcgaccattc tctttatctg ctcgtaaacc
     1561 ctgctgttgc aaggctttgt taaaacttgg ttgcttttga acaccccgtt tatacccttc
     1621 agcaacagga acaatattca aatgcaggtg cggacttact tcgtcattat gaataacagc
     1681 attgtagacg gataaactag gattccgttc tttaaattct ttgaaatact caactaaaat
     1741 tttgttggca atcactcgat tttgttctgc ttgttgttcc gatatgccag tagaagaacc
     1801 atcatcacga gtagtacgaa aatcatcaag agtaccaatt tgcacgataa attctcgctg
     1861 tggttccatt tttttatcct tgcgaacctt tgctaaatag tcctcgattt ttctatcggc
     1921 tcttttctgc tttgcattat atttttctac ggcttcaccg aataattctt catatttttc
     1981 acgaatattt atttgttcca aatagatatt ttcatccgat tttgtgaaat caatatgctt
     2041 atgccagtca ttgatttttt ggctatcagt taactcacga ttattatgag aaatgcttgt
     2101 attctttgtt ccctttttga acgaaatact aaaccccaag ttaaccccct ccttcgcgct
     2161 gtcgctaata aaaagagtgt aaacctttct gttactcttt gtcaaagagt aacattttcc
     2221 taattgtgac atggctgtca caattccaaa tgctctccga gggtattcgc tgtcacaagt
     2281 gacaacgaaa aaaggagccg aaagcgtgtc acgctctcaa ctccttttac gctttatttt
     2341 gcttcacgca aaataatcgc ttatcgtaaa ttcacgtcat taaatattga cgtaaattta
     2401 ctctcactca tctgactttt cttattcggt atcactccga ataagccgtc agattcatcg
     2461 ggataatctc gttcgcttgg cgctgatttt tcatcagcaa gccactcatt atccactgat
     2521 ttttcgtgtt gctgatcgtc agaaatcgac gatagccacc gctcaaaatc agcaaaagat
     2581 tcaaacccaa aatgcttgcg aagcgccttg cccatttcag cattttcctt ctcaatcaat
     2641 cgctttttct gttggcgaag ttttgcctgc tcttttttca atttttcttc ttgtgcttta
     2701 atatcagcta aagttactcc catgaattac aactccttac ccttagattc attcctataa
     2761 ataacaccaa tttgattagt catttagcgc cctccacaat ttctcgtgca tttccgccat
     2821 atcatcaaga atagcacgat cccattcagg gctatggtgt tcaccgaaca cttgaaaata
     2881 agcattttcc acagctgcct cagcattttc cccatccaac cgacgataaa cagtcaccat
     2941 catagcctta aaaagctgac gatttccgcc acaattacaa ttatctttca ccgcttcata
     3001 tagcctttgc ttatccagtt tcatcaccct ccttatcata gcgttccgca aagaatttct
     3061 tctcatcatc cgtcaactca cgaacggcca ccgagtaatt ggcatccttt tgcatccagc
     3121 tagcagtcaa gaaccagaaa tagtcgtttt catctttttt cttgtagtga tcgagttcgc
     3181 cactctcgta ttttttcctg tactccttga acacgccatt gaaagtcatc agctgacgac
     3241 ctttcatagc aaaatagaac gtgtcaaaaa cgtcttggga ataagtcatt tcaaaatctt
     3301 tggcagaata tttagcaatt tccgataccg ccttttcttg ccggtaccca ttgaccttgc
     3361 ggacatccaa cgaacaaatt tcatcggtgc catcctcgtt aatgccatcc aaaccggtga
     3421 catcccgcca catatctagc cattcagact gttttatata atagcctttc attttgaaat
     3481 aatgcttagg taccgccata atcaagtgaa aatgcgggtt ataatcattt cggcttttgt
     3541 tatacgttat ctccaatttt cggacatagc ccttgattga agtcatcacc ctttttcgac
     3601 gaaatagctt cgacagtgct ttattgaaac gatcaatttc ttcggataat ttgtccgccg
     3661 gcacgttagg cgtggtgagt gtcataaaga tatattcata gcccttttca gcttgaatag
     3721 cttccatcat gatagacaac atatagctgt ctttacgggc ttttcggtat gcacaaaccg
     3781 gacaaaaccg gtttttacag aacatgccat gaaccatctt tttcttctcc ttatcaaccg
     3841 ttgctatgaa ctccatgaat gatccacagg ctttcatgtt ttccaaggtt t
//
