LOCUS       AP026592                2181 bp    DNA     circular BCT 11-AUG-2022
DEFINITION  Enterococcus faecium JHP36 plasmid pJHP36_5 DNA, complete sequence.
ACCESSION   AP026592
VERSION     AP026592.1
DBLINK      BioProject: PRJDB13429
            BioSample: SAMD00466805
KEYWORDS    .
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillota; Bacilli; Lactobacillales; Enterococcaceae;
            Enterococcus.
REFERENCE   1
  AUTHORS   Hashimoto,Y., Suzuki,M. and Tomita,H.
  TITLE     Analysis of enterococcal linear plasmids
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2181)
  AUTHORS   Hashimoto,Y. and Tomita,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-AUG-2022) Contact:Yusuke Hashimoto Gunma University,
            Bacteriology Graduate School of Medicine; 3-39-22, Showa, Maebashi,
            Gunma 371-0804, Japan
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method       :: Canu v. 2.1.1
            Genome Coverage       :: 50x
            Sequencing Technology :: Illumina miniseq; Nanopore MinION
            ##Genome-Assembly-Data-END##
            Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
FEATURES             Location/Qualifiers
     source          1..2181
                     /organism="Enterococcus faecium"
                     /mol_type="genomic DNA"
                     /strain="JHP36"
                     /host="Homo sapiens"
                     /db_xref="taxon:1352"
                     /plasmid="pJHP36_5"
                     /geo_loc_name="Japan"
                     /collection_date="2002"
     gene            200..1165
                     /locus_tag="EfmJHP36_35410"
     CDS             200..1165
                     /locus_tag="EfmJHP36_35410"
                     /inference="COORDINATES: ab initio
                     prediction:MetaGeneAnnotator"
                     /inference="similar to AA sequence:RefSeq:WP_011117535.1"
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation protein"
                     /protein_id="BDP59062.1"
                     /translation="MSKKGTIINEWEKLTAPSNRRLSVQTLTTPLKIQWSIDRITIVGK
                     LKENIYYHTQNDVLILDFEQLMRLNENNGYVKSVGLNGWQIVDKHDENIAYIEILKYQE
                     GQGRIDFNPNKISQFLAGSMKNFIHDLFLEPHFSRADIACDIIDVPDDFITQYRVVDPV
                     SFKPIYGRSGKLETAYWGSRASERQIRMYNKKLEQETKRKIVPPEIKTWWRLELQLRRG
                     KATDWYAMVHESLDSFASPHFLPTDTKHTDRIMIAGLISDQNLWAGLARHTKYKYRNLL
                     KKESQSDELVNHLRETFSESADVLKKELDTWLLGLDVTEE"
                     /name="replication initiation protein"
     Typing          279..1162
                     /name="rep_cluster_943"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="88.362"
                     /coverage="98.0"
                     /evalue="0.0"
ORIGIN
        1 aaaatagtcg agcagtgttg acgcactctc gacctttacg gaaactaatc acactagctc
       61 cgtaacttct taatcattat acgaatattt ttaggtttct tcaagactag agattttttg
      121 gtaatgaatt tttaagagtt acgtgaactt ttgaaaattc tttccagaag tctctttttt
      181 ctttgaggag gaactaaatt tgagtaaaaa aggcacgatc ataaatgagt gggaaaaatt
      241 aacagccccc tctaacaggc ggttaagtgt gcaaactttg accacccccc ttaaaataca
      301 gtggtcaatt gaccgaatta ccattgttgg aaaactcaaa gagaatattt attatcacac
      361 gcaaaatgat gtattgattt tagactttga acagttaatg cgactgaatg aaaataatgg
      421 ttatgttaaa tctgttggtc taaatggttg gcaaattgtg gataagcatg atgagaatat
      481 tgcttacatt gaaattttga aatatcaaga agggcaaggg cgaattgact ttaacccaaa
      541 taaaattagc caatttttgg cgggctcgat gaagaacttt atccatgatt tatttttaga
      601 accacatttc tcacgtgcag atattgcttg cgacattatc gatgtgccag atgattttat
      661 tacgcaatat cgtgtggttg accctgtttc tttcaaacca atctatgggc ggtctgggaa
      721 gctggaaacg gcatattggg gtagtcgtgc cagtgagcga caaataagga tgtacaacaa
      781 aaaattggaa caagaaacca aacggaaaat tgtaccaccg gaaataaaaa cttggtggcg
      841 actggaattg cagttacggc gtggaaaagc tactgattgg tatgcgatgg ttcatgaaag
      901 tttagacagt ttcgcaagtc ctcatttttt gccgactgat acaaagcata ctgatagaat
      961 tatgattgca ggattgattt cagatcaaaa tttatgggct ggcttggctc gtcatacaaa
     1021 atataaatat cgaaatttgt tgaaaaaaga aagccaaagt gatgagttag ttaatcattt
     1081 acgagagaca ttttcggaat cggcagatgt tttgaaaaaa gaattggata cgtggctttt
     1141 ggggttggac gtgacggaag aatgagtgga tgaatttttg tttccacttt ttattttcag
     1201 cacaagtcgg catggtgggt cgtgcgtttg cagcaagagc gaaaaaacgc taacgaatcc
     1261 gcaaatgccg acttggataa aacagttgcg caaagagact tggcttttta taataaattt
     1321 agggatatcc cagtgtcact ctttggggta attcggggga aggagttacc cctcactctg
     1381 gaaaattaga gcgaagcaga cgagattatc ccaatgaata tgacggctta ctcggagtga
     1441 taccgagtaa aaaagtcaga taagtgagag taaatttacg tcaatgttta agataagcga
     1501 ttattttgcg tgaagcaaaa taaagcgtaa aaggagttga gagcgtgaca cgctttcggc
     1561 tccttttttc gttgtcactt gtgacagcga ataccctcgg agagcatttg gaattgtgac
     1621 agccatgtca caattaggaa aatgttactc tttgtcaaag agtaacagaa aggtttacac
     1681 tctttttatt ggcgacagcg cgaaggaggg gtttaacttg gggtttagta tttcgttcaa
     1741 aaagggaaca aaaaatacaa gcatttctca taataatcgt gagttaactg atagccaaaa
     1801 aatcaatggt ttgtctggta gaaaataatt agcagattta caagtgggaa ataaaaagct
     1861 gaaagaagaa aattgcattt caaactacat tttctacaat agctctaaaa tggcatattt
     1921 tgcgttctga gcggttttag cgtttatttc gtttagttat cggcacaatc ggtgaaacac
     1981 gttagaggag cgaaaatgga gcctgtaagg cgactggtag cggaacggtc gtgttagatt
     2041 gtgtagccga tagctgaacg aaataaatgc tggcagcgcc attctatttc ggcaggagga
     2101 ggctcaaggg gttcggggaa tgaaattccc tgaggtcttt ttattttttc tagaggagtg
     2161 ctataatcaa agaaaatgag a
//
