LOCUS       AP026585                2189 bp    DNA     circular BCT 11-AUG-2022
DEFINITION  Enterococcus faecium JHP35 plasmid pJHP35_5 DNA, complete sequence.
ACCESSION   AP026585
VERSION     AP026585.1
DBLINK      BioProject: PRJDB13429
            BioSample: SAMD00466804
KEYWORDS    .
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillota; Bacilli; Lactobacillales; Enterococcaceae;
            Enterococcus.
REFERENCE   1
  AUTHORS   Hashimoto,Y., Suzuki,M. and Tomita,H.
  TITLE     Analysis of enterococcal linear plasmids
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2189)
  AUTHORS   Hashimoto,Y. and Tomita,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-AUG-2022) Contact:Yusuke Hashimoto Gunma University,
            Bacteriology Graduate School of Medicine; 3-39-22, Showa, Maebashi,
            Gunma 371-0804, Japan
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method       :: Canu v. 2.1.1
            Genome Coverage       :: 50x
            Sequencing Technology :: Illumina miniseq; Nanopore MinION
            ##Genome-Assembly-Data-END##
            Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
FEATURES             Location/Qualifiers
     source          1..2189
                     /organism="Enterococcus faecium"
                     /mol_type="genomic DNA"
                     /strain="JHP35"
                     /host="Homo sapiens"
                     /db_xref="taxon:1352"
                     /plasmid="pJHP35_5"
                     /geo_loc_name="Japan"
                     /collection_date="2002"
     gene            661..1626
                     /locus_tag="EfmJHP35_34450"
     CDS             661..1626
                     /locus_tag="EfmJHP35_34450"
                     /inference="COORDINATES: ab initio
                     prediction:MetaGeneAnnotator"
                     /inference="similar to AA sequence:RefSeq:WP_011117535.1"
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation protein"
                     /protein_id="BDP55521.1"
                     /translation="MSKKGTIINEWEKLTAPSNRRLSVQTLTTPLKIQWSIDRITIVGK
                     LKENIYYHTQNDVLILDFEQLMRLNENNGYVKSVGLNGWQIVDKHDENIAYIEILKYQE
                     GQGRIDFNPNKISQFLAGSMKNFIHDLFLEPHFSRADIACDIIDVPDDFITQYRVVDPV
                     SFKPIYGRSGKLETAYWGSRASERQIRMYNKKLEQETKRKIVPPEIKTWWRLELQLRRG
                     KATDWYAMVHESLDSFASPHFLPTDTKHTDRIMIAGLISDQNLWAGLARHTKYKYRNLL
                     KKESQSDELVNHLRETFSESADVLKKELDTWLLGLDVTEE"
                     /name="replication initiation protein"
     Typing          740..1623
                     /name="rep_cluster_943"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="88.588"
                     /coverage="98.0"
                     /evalue="0.0"
ORIGIN
        1 tttcgttcaa aaagggaaca aaaaatacaa gcatttctca taataatcgt gagttaacat
       61 agccaaaaaa tcaatggttt gtctggtaga aaataattag cagatttaca agtgggaaat
      121 aaaaagctga aagaagaaaa ttgcatttca aactacattt tctacaatag ctctaaaatg
      181 gcatattttg cgttctgagc ggttttagcg tttatttcgt ttagttatcg gcacaatcgg
      241 tgaaacacgt tagaggagcg aaaatggagc ctgtaaggcg actggtagcg gaacggtcgt
      301 gttagattgt gtagccgata gctgaacgaa ataaatgctg gcagcgccat tctatttcgg
      361 caggaggagg ctcaaggggt tcggggaatg aaattccctg aggtcttttt attttttcta
      421 gaggagtgct ataatcaaag aaaatgagaa aaaagagtaa aaaaatagtc gagcagtgtt
      481 gacgcactct cgacctttac ggaaactaat cacactagct ccgtaacttc ttaatcatta
      541 tacgaatatt tttaggtttc ttcaagacta gagatttttt ggtaatgaat ttttaagagt
      601 tacgtgaact tttgaaaatt ctttccagaa gtctcttttt tctttgagga ggaactaaat
      661 ttgagtaaaa aaggcacgat cataaatgag tgggaaaaat taacagcccc ctctaacagg
      721 cggttaagtg tgcaaacttt gaccaccccc cttaaaatac agtggtcaat tgaccgaatt
      781 accattgttg gaaaactcaa agagaatatt tattatcaca cgcaaaatga tgtattgatt
      841 ttagactttg aacagttaat gcgactgaat gaaaataatg gttatgttaa atctgttggt
      901 ctaaatggtt ggcaaattgt ggataagcat gatgagaata ttgcttacat tgaaattttg
      961 aaatatcaag aagggcaagg gcgaattgac tttaacccaa ataaaattag ccaatttttg
     1021 gcgggttcga tgaagaactt tatccatgat ttatttttag aaccacattt ctcacgtgct
     1081 gatattgctt gcgacattat cgatgtgcct gatgatttta ttacgcaata tcgtgtggtt
     1141 gaccctgttt cattcaaacc aatctatggg cggtctggga agctggaaac ggcatattgg
     1201 ggtagtcgtg ccagtgagcg acaaataagg atgtacaaca aaaaattgga acaagaaacc
     1261 aaacggaaaa ttgtaccacc ggaaataaaa acttggtggc gactggaatt gcagttacgg
     1321 cgtggaaaag ctactgattg gtatgcgatg gttcatgaaa gtttagacag tttcgcaagt
     1381 cctcattttt tgccgactga tacaaagcat actgatagaa ttatgattgc aggattgatt
     1441 tcagatcaaa atttatgggc tggcttggct cgtcatacaa aatataaata tcgaaatttg
     1501 ttgaaaaaag aaagccaaag tgatgagtta gttaatcatt tacgagagac attttcggaa
     1561 tcggcagatg ttttgaaaaa agaattggat acgtggcttt tggggttgga cgtgacggaa
     1621 gaatgagtgg atgaattttt gtccactttt ttattttcag cacaagtcgg catggtgggt
     1681 cgtgcgtttg cagcaagagc gaaaaaacgc taacgaatcc gcaaatgccg acttggataa
     1741 aacagttgcg caaagagact tggcttttta taataaattt agggatatcc cagtgtcact
     1801 ctttggggta attcggggga aggagttacc cctcactctg gaaaattaga gcgaagcaga
     1861 cgagattatc ccaatgaata tgacggctta ctcggagtga taccgagtaa aaaagtcaga
     1921 taagtgagag taaatttacg tcaatgttta agataagcga ttattttgcg tgaagcaaaa
     1981 taaagcgtaa aaggagttga gagcgtgaca cgctttcggc tccttttttc gttgtcactt
     2041 gtgacagcga ataccctcgg agagcatttg gaattgtgac agccatgtca caattaggaa
     2101 aatgttactc tttgtcaaag agtaacagaa aggtttacac tctttttatt ggcgacagcg
     2161 cgaaggaggg gtttaacttg ggtttagta
//
