LOCUS       AP026523                4073 bp    DNA     circular BCT 23-JUL-2022
DEFINITION  Escherichia coli TUM13926 plasmid pMTY13926_NA3 DNA, complete
            sequence.
ACCESSION   AP026523
VERSION     AP026523.1
DBLINK      BioProject: PRJDB13833
            BioSample: SAMD00510806
KEYWORDS    .
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1
  AUTHORS   Ikegaya,K., Aoki,K., Komori,K., Ishii,Y. and Tateda,K.
  TITLE     Complete genome of blaCTX-M-2-producing Enterobacteriales
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4073)
  AUTHORS   Aoki,K. and Ishii,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-JUL-2022) Contact:Kotaro Aoki Toho University,
            Department of Microbiology and Infectious Diseases Toho University
            School of Medicine; 5-21-16, Omori-nishi, Ota-ku, Tokyo 143-8540,
            Japan
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method       :: Unicycler v. 0.4.8-beta
            Genome Coverage       :: 98x
            Sequencing Technology :: Illumina MiSeq; ONT MinION
            ##Genome-Assembly-Data-END##
            Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
FEATURES             Location/Qualifiers
     source          1..4073
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="TUM13926"
                     /isolation_source="animal"
                     /db_xref="taxon:562"
                     /plasmid="pMTY13926_NA3"
                     /geo_loc_name="Japan"
                     /collection_date="2016"
     gene            1843..2097
                     /locus_tag="TUM13926_51320"
     CDS             1843..2097
                     /locus_tag="TUM13926_51320"
                     /inference="COORDINATES: ab initio
                     prediction:MetaGeneAnnotator"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="BDP17539.1"
                     /translation="MSRTLEQKIADAEARLQRLKAKSRSLDTAQKVVVGAALLAKVRKP
                     EEVQLRAWLLQFLKAEVTRQADVTRILPLINELEALPEQ"
                     /name="hypothetical protein"
     gene            2631..3332
                     /locus_tag="TUM13926_51330"
     CDS             2631..3332
                     /locus_tag="TUM13926_51330"
                     /inference="COORDINATES: ab initio
                     prediction:MetaGeneAnnotator"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="BDP17540.1"
                     /translation="MSDLIAYKSNALIEASYKLTLQEQRFLLVCISRLKSGEDSPSPDE
                     QKTMTITAAEFHDAFPDMGRQHAEARLKEAIDRLWDRSVIIKNEEKREEFRWVQYRAQY
                     FKGEAKVDITFSDAIMPYLTQLKGQFTRVVVKNVSSLSSTYSIRIYELLQQFRSTGDRT
                     IAIDDFRTMLAVEDKYQQFKDLNKMIIKPAIAELNEKSDLVVTVETIKKGRTVVALHFR
                     FKEDKQIKMTI"
                     /name="hypothetical protein"
     gene            complement(3590..4048)
                     /locus_tag="TUM13926_51340"
     CDS             complement(3590..4048)
                     /locus_tag="TUM13926_51340"
                     /inference="COORDINATES: ab initio
                     prediction:MetaGeneAnnotator"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="BDP17541.1"
                     /translation="MQGRLPPTLMPVMSSVDRETRQLQLLLVMGVDDSLGGVIRLNGTL
                     YPAFAVPSADNRHLVISALTDKGLRYAGYGVAVNHDADSHISPAPELMQFHLKTREAPL
                     FAAVNTPEKQPDHLFRSLGFNRTWEEWQREEDARTHTTERRHDRGWSQ"
                     /name="hypothetical protein"
     Typing          complement(1307..1665)
                     /name="MOBQ"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="100.0"
                     /coverage="100.0"
                     /evalue="0.0"
     Typing          1666..1842
                     /name="MOBQ"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="100.0"
                     /coverage="100.0"
                     /evalue="5.61e-88"
     Typing          2632..3332
                     /name="rep_cluster_1778"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="100.0"
                     /coverage="100.0"
                     /evalue="0.0"
     Typing          complement(4..1751)
                     /name="MOBQ"
                     /typing="relaxase"
                     /tool="MOB-suite"
                     /identity="96.593"
                     /coverage="99.0"
                     /evalue="0.0"
ORIGIN
        1 gatggcatgg ctggctggcg gtcttctcca agacagaaag actccggcca tgtcttcggc
       61 tggcggagat tgcgggtatg ttgcggccat gtctggcaaa cctgcgtcag cagttgctca
      121 aaggttgcag aggaataaac acgttgcagt ggcggacgtt ggccgatttc gcttcggtca
      181 cagatataac cactcctgtc acgcattaaa tcaacactct caaagattct ggtgcggtat
      241 ttctccagct cgttccccca gagcgtatat tctccgttcc ggttgtgaag cagaaggtaa
      301 caggtcattt ccccgttacc aggcatggga gcctcgccat accccgtaac gactgctctc
      361 agcacccctg aatccataac ggcattgtca tttttcctga gctgctccgc gcgactacgt
      421 tcagtatctt cctgttcctt ccggcgcaat tcctcttcac gtttaagcaa ctgggctctg
      481 agagctgcaa ggccggattc cccccactgc tgccactgtt tttcaaatgc catctgactc
      541 gcgggaatgt cctgtttctc caccttccgg taatgctgtc gtaatttttc catttgctgg
      601 ctcagagact ggatttttcc ctgctcacta cggtattccg gtgccgccca ttgcatcagg
      661 ggaatacggg aaaaaccgga cgaaaacggc gatgattttt tcaggctggc agcatggctc
      721 atcgcttcct ttcgttcggt gttcagctct tcccagcgtc tgcgcgtcgc ctgcatatct
      781 gccatcatcg acatggcatt actggtgagt ttccatgccg agttactgtc cttcggcaac
      841 gcttcgataa tgtcacgtag tgtgtacgaa gttgcgttgt caggaagccc gatattcaga
      901 aggtcagcca cacggcgggc aggctctgtc agccctccgt tcctgagttc ggtgcgggaa
      961 atctgtattt ccaggttaag cctgttaatc agacgattct gttcgccgcg ttctgtttcg
     1021 ataccgcgtg tttccatcgc acaggcagac tttccgaggt gaataccagg cgttttctca
     1081 agcccctgtc gctcgtatga acgatggtct atctcttcct gataaccggc gttcgccagt
     1141 gccctgtttg catggtcagc ccatgatgcc cgccacgtct cggcatgtgt ccggtcgttc
     1201 cagtccctga cctttccgct gaacccagca ggtccgatag ccctcgtggt cagcatgatg
     1261 tgcgcatggg gatttgtttt atccatgtga tggaacgcca catcagcaat catgccctga
     1321 ctgacaaagt tttctctgac aaaggcgaga acggtttccc gtgcggcatc ctgcggcagt
     1381 tcgtggggga tggcgagttc aatttcccgc gcaagttgtg agttcttccg gcgttcggcc
     1441 ttctcaacgg cattccagag ttcggcacgg ttcgtacacc aggcaggggc ggtggcgggg
     1501 gtcagaatca cagcctcagc cacaccgctt ttgcgggtgt agtcgtgagt cagtccggta
     1561 cgctcatcaa gcatcagtga accggaacga taggcagcgg aagctacggc gctgtagccg
     1621 ctgcttctgg agataatttt catgctgaga tgataaatcg ccatttctgc cgtaatgcct
     1681 ttttgtagtt ttctttcagc cccgcagggc gcacacaatc gaaacggagt ggagattgta
     1741 taagtgcgca cttcgtgatt tgccgtgcat tatgccagct cagtttttaa actaccagtg
     1801 acgcgctaaa atgcgatttt tcatcgcgca cggagttaca tcatgagcag aacgctcgaa
     1861 cagaagattg ctgatgctga ggcgagatta cagcgcctga aggcgaagag ccggagcctg
     1921 gacacagcgc agaaggttgt tgtgggtgct gcattgctgg caaaggtcag aaagccggag
     1981 gaggtgcagt tgcgtgcctg gttactccag ttcctgaagg cagaggtgac acgacaggct
     2041 gatgtgacgc gcatactgcc gctgattaac gagctggagg cgctgccaga acagtgattg
     2101 tatcgtccgc tcgccgcagc cccagcgacc gagcgttagc gagcgagtgg gcgaggaagc
     2161 ggaagtgaat cagtcgccag gttgagcaca tacgcacggt ttttcggcag gtgatatgcg
     2221 ctgaacccgc atgaatactg ggtttccaca gggttggagg gggtgtattc gaaacttgca
     2281 attctgcttt attgcaacgc attgttttta ttggtttttt gttttcagca ccccaagtta
     2341 tccacaggct cgccgttaag tttttaagat cttattttta gatctttttt tttaaaacct
     2401 ttttaggtct tgtaacacca tgattttaaa gatgttctgg caagataagt ggagcttttg
     2461 ggggtgaaag gtggagcttt tgggggtgaa aggtggagct tttgggggtg aaaggtggag
     2521 cttttggggg tgtaatccac agaaaaaggg ggttgcaaaa aaaaaacttc cacccatatg
     2581 ataagtggcg tacagtaaaa aaacgccacc aatagcaacg agcaagcgaa atgtcagatc
     2641 tgatagctta caaatcaaac gcccttatcg aggcaagcta caagctcact ttgcaggaac
     2701 agcgcttcct gctggtctgt atcagccgcc taaaatccgg agaagattcc ccttcgccgg
     2761 atgaacaaaa aaccatgacc atcacggctg cagagtttca tgatgccttt cctgacatgg
     2821 gacggcagca cgctgaagct aggctcaagg aagcgataga tcgcctctgg gacaggtcag
     2881 taatcatcaa gaacgaggaa aaacgagaag agttccgctg ggtgcagtac cgggcgcagt
     2941 atttcaaagg tgaggcgaaa gtagatatca ccttctccga tgccatcatg ccgtatctga
     3001 cacagctcaa ggggcagttt acgcgggtag tcgtgaagaa cgtctccagc ctttccagca
     3061 cctacagcat ccgcatttac gagctgctcc agcagttccg cagcaccggt gacagaacga
     3121 tagctatcga tgatttccga accatgcttg ccgttgaaga taaatatcaa caattcaaag
     3181 acttgaataa gatgataatc aagccagcca tcgccgaact gaacgaaaaa agcgatctgg
     3241 ttgtaactgt tgagacgatc aaaaaggggc gcacggttgt agccctgcat tttcgcttca
     3301 aggaagacaa acagatcaag atgacgatct aaaatcgatt ttaaggcacc taaaacgctc
     3361 cctgctgcgt tttttttgtg ttagtagtgc gaaggtacta ttgaagtgaa aaattgcgtc
     3421 aaaaacgctc tgatgcagcg aaaaaagacc ccccaatttt tgggggcgga aaaacaaaac
     3481 tatgcttgcg ttatgtgagt gtgcttcttg cattcatccc tgtcgatgaa catcgaagaa
     3541 catcgacgaa cataacacga tgttaaacaa aacaaaatat tgttcacatt cactgtgacc
     3601 aaccgcgatc atgtctcctc tcggtggtgt gtgttcgtgc atcttcctcg cgctgccatt
     3661 cctcccaggt acgattaaaa cccagcgagc ggaacagatg atccggctgt ttttctggtg
     3721 tgttgacggc agcaaaaagc ggtgcctcac gggttttcag atgaaactgc atcagttctg
     3781 gtgcaggtga tatgtggctg tctgcatcgt gatttacggc aacaccatac cctgcatacc
     3841 gtaacccctt atcggtcagc gcactgatga ccagatgcct gttatcggct gagggaacgg
     3901 caaacgcggg atacagcgta ccattaagcc ggataacacc gcccagagag tcatccacgc
     3961 ccatgaccag caaaagctga agctggcggg tttcccggtc gacagaactc atgaccggca
     4021 tcagcgtcgg tggcagacgt ccctgcataa aatccacctt ccttgccgct ggt
//
