LOCUS       AP026482                4087 bp    DNA     circular BCT 23-JUL-2022
DEFINITION  Escherichia coli TUM2809 plasmid pMTY2809_NA1 DNA, complete
            sequence.
ACCESSION   AP026482
VERSION     AP026482.1
DBLINK      BioProject: PRJDB13833
            BioSample: SAMD00510767
KEYWORDS    .
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1
  AUTHORS   Ikegaya,K., Aoki,K., Komori,K., Ishii,Y. and Tateda,K.
  TITLE     Complete genome of blaCTX-M-2-producing Enterobacteriales
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4087)
  AUTHORS   Aoki,K. and Ishii,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-JUL-2022) Contact:Kotaro Aoki Toho University,
            Department of Microbiology and Infectious Diseases Toho University
            School of Medicine; 5-21-16, Omori-nishi, Ota-ku, Tokyo 143-8540,
            Japan
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method       :: Unicycler v. 0.4.8-beta
            Genome Coverage       :: 201x
            Sequencing Technology :: Illumina MiSeq; ONT MinION
            ##Genome-Assembly-Data-END##
            Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
FEATURES             Location/Qualifiers
     source          1..4087
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="TUM2809"
                     /db_xref="taxon:562"
                     /plasmid="pMTY2809_NA1"
                     /geo_loc_name="Japan"
                     /collection_date="2006"
     gene            complement(482..2641)
                     /locus_tag="TUM2809_46930"
     CDS             complement(482..2641)
                     /locus_tag="TUM2809_46930"
                     /inference="COORDINATES: ab initio
                     prediction:MetaGeneAnnotator"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="BDO77815.1"
                     /translation="MAIYHLSMKIISRNSGYSAVASAAYRSGSLMLDERTGLTHDYTRK
                     SGVAEAVILTPATAPAWCTNRAELWNAVEKAERRKNSQLAREIELAIPRELPQDAARET
                     VLAFVRENFVSQGMIADVAFHHMDKTNPHAHIMLTTRAVGPAGFGGKVRDWNDRTHAET
                     WRASWADHANRALANAGYQEEIDHRSYERQGLEKTPGIHLGKSACAMETRGIETERGEQ
                     NRLINRLNLEIQISRTELRNSGLTEPARRVADLLNIVLPDNATSYTLRDIIEALPKDSN
                     AAWKLTSNAMSMMADMQATRRRWEELNTERKEAMSHAASLKKSSPFSSGFSRIPLMQWA
                     APEYRSEQGKIQSLSQQMEKLRQHYRKVEKQDIPASQTAFEKQWQQWGASGLAALRVQL
                     LKREEELRRKEQEDTERSRAERRAEQLRKNDNAVMDSGVLSAVVTEYGEAPMPGNGEMT
                     CYLLLHNRNGEYTLWGNELEKYRTRIFERVDLMRDRSGYICDRSEIGQHPPLQRVYSSA
                     TFEQLLTQVCQTWPQYTRNLRQPKTWPESFCLGEDRQPAMPSLAARKVDFTQGRLLATL
                     MPVMSSVDRETRQLQLLLVMGVDDSLGGVVRLNGTLYPAFAVPSADNSQLVISALTDKG
                     LRYAGYGVAVNHDADSHISPAPELMEFHLKTREAPLFAAVNTPEKQPDHLFRSLGFNRT
                     WDEWRREEDARTHATERRHDRGWSQ"
                     /name="hypothetical protein"
     gene            2820..3074
                     /locus_tag="TUM2809_46940"
     CDS             2820..3074
                     /locus_tag="TUM2809_46940"
                     /inference="COORDINATES: ab initio
                     prediction:MetaGeneAnnotator"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="BDO77816.1"
                     /translation="MSRTLEQKIADAEARLQRLKAKSRSLDTAQKVIVGAALLAKVRKP
                     EEVQLRAWLLQFLKAEVTRQADVTRILPLINELEALPGQ"
                     /name="hypothetical protein"
     Typing          complement(2284..2642)
                     /name="MOBQ"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="100.0"
                     /coverage="100.0"
                     /evalue="0.0"
     Typing          2643..2819
                     /name="MOBQ"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="100.0"
                     /coverage="100.0"
                     /evalue="5.61e-88"
     Typing          2..226
                     /name="rep_cluster_1778"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="100.0"
                     /coverage="100.0"
                     /evalue="5.29e-114"
     Typing          3740..3943
                     /name="Col8282"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="89.756"
                     /coverage="99.0"
                     /evalue="6.8999999999999995e-68"
     Typing          complement(486..2728)
                     /name="MOBQ"
                     /typing="relaxase"
                     /tool="MOB-suite"
                     /identity="99.599"
                     /coverage="100.0"
                     /evalue="0.0"
ORIGIN
        1 tggggaacgt attatcgccc tcgatgattt taaatcatca ctgatgcttg atggtaaata
       61 taaagatttc aaaacgttaa acagggatct aataaaaccc tgtgttgacg aactgaacaa
      121 aaaaagcgac ctggctgtaa cggttgagac gatcaaaaag gggcgcacgg ttgtagccct
      181 gcattttcgc ttcaaggaag acaaacagat caagatgacg atctagaatc gattttaagg
      241 cacctaaaac gctccctgct gcgttttttt tgtgttagta gtgcgaaggt actattgaag
      301 tgaaaaattg cgtcaaaagc gctctaatgc agcgaaaaaa gaacccccat ttttcggggg
      361 cggaaaaaca aaactatgct tgcattatgt gtgtgcttct tgcattcatc cctgtcgatg
      421 aacatcgaag aacatcgacg aacataacac gatgttaaac aaaacaaaat attgttcaca
      481 ttcactgtga ccaaccgcga tcatgtctcc tctcggtggc gtgtgttcgt gcatcttcct
      541 cgcgccgcca ttcgtcccag gtacgattaa aacccagcga gcggaacaga tgatccggct
      601 gtttttctgg tgtgttgacg gcagcaaaaa gcggtgcctc acgggttttc agatgaaact
      661 ccataagttc cggcgcaggt gatatgtggc tgtctgcatc gtgatttacg gcaacaccat
      721 accctgcata ccgtaacccc ttatcggtca gtgcactgat gaccagctgg ctgttatcgg
      781 ctgagggaac ggcaaacgcg ggatacagcg taccattaag ccggacaaca ccgcccagag
      841 agtcatccac gcccatgacc agcaaaagct gaagctggcg ggtttcccgg tcgacagaac
      901 tcattaccgg catcagcgtc gctagcagac gtccctgcgt aaaatccacc ttccttgctg
      961 ccagtgatgg catggctggc tggcggtctt ctccaagaca gaaagactcc ggccatgtct
     1021 tcggctggcg gagattgcgg gtatattgcg gccatgtctg gcaaacctgc gtcagaagtt
     1081 gctcaaaggt cgcagaggaa taaacacgtt gcagtggtgg atgttgaccg atttcgcttc
     1141 ggtcacagat ataaccactc ctgtcacgca ttaaatcaac acgctcaaag attctggtgc
     1201 ggtatttctc cagctcgttc ccccagagcg tgtattctcc gttccggttg tgaagcagaa
     1261 ggtaacaggt catttccccg ttaccaggca tgggggcctc gccatactcc gtaacgactg
     1321 cgctcagtac ccctgaatcc ataacggcat tgtcattttt cctgagctgt tccgctcgtc
     1381 gctccgcgcg actacgttct gtatcctcct gctccttccg gcgcaattcc tcttcacgtt
     1441 taagcaactg gactctgaga gctgcaaggc cggatgcccc ccactgctgc cactgttttt
     1501 caaatgccgt ctgactcgcg ggaatgtcct gtttctccac cttccggtaa tgctgtcgca
     1561 atttttccat ttgctggctc agcgactgga tttttccctg ttcgctacgg tattccggtg
     1621 ccgcccattg catcagggga atacgggaaa aaccggacga aaacggcgat gattttttca
     1681 ggctggcagc atggctcatc gcttcctttc gttcggtgtt cagctcttcc cagcgtctgc
     1741 gcgtcgcctg catatctgcc atcatcgaca tggcattact ggtgagtttc catgccgcat
     1801 tactgtcctt cggcaacgct tcgatgatgt cacgtagtgt gtacgaagtt gcgttgtcag
     1861 gaagcacgat attcagaagg tcagccacac ggcgggcagg ctctgtcagc ccgctgtttc
     1921 tgagttcggt acgggaaatc tgtatttcca ggttaagtct gttaatcaga cgattctgtt
     1981 cgccgcgttc tgtttcgata ccgcgtgttt ccatcgcaca ggcagacttt ccgaggtgaa
     2041 taccaggcgt tttctcaagc ccctgtcgct cgtatgaacg atggtctatc tcttcctgat
     2101 aaccggcgtt cgccagtgcc ctgttcgcat ggtcagccca tgatgcacgc cacgtctcgg
     2161 catgtgtccg gtcgttccag tccctgacct ttccaccgaa tccagcaggt ccgacagctc
     2221 tcgtggtcag catgatgtgc gcatggggat ttgttttatc catgtgatgg aacgccacat
     2281 cagcaatcat gccctgactg acaaagtttt ctctgacaaa ggcgagaacg gtttcccgtg
     2341 cggcatcctg cggtagttcg cgggggatgg cgagttcaat ttcccgcgca agttgtgagt
     2401 tcttccggcg ttcggccttc tcaacggcat tccagagttc ggcacggttc gtacaccagg
     2461 caggggctgt cgcgggagtc agaatcacag cttcagccac accgcttttg cgggtgtagt
     2521 cgtgagtcag tccggtacgc tcatcaagca tcagtgaacc ggaacgatag gcagcagaag
     2581 caacggcgct gtagccgctg tttctggaga tgattttcat gctgagatga taaatcgcca
     2641 tttctgccgt aatgcctttt tgtggttttc tttcagcccc gcagggcgca cacaatcgaa
     2701 acggagtgga gattgtataa gtgcgcactt cgtgattttc cgtgcattat gccagctcag
     2761 tttttaaact accagtgacg cgctaaaatg cgatttttca tcgcgcacgg agttacatca
     2821 tgagcagaac actcgaacag aagattgctg atgctgaggc cagattacag cgcctgaagg
     2881 cgaagagcag gagtctggac acagcgcaga aggtcattgt gggtgcagca ttgctggcaa
     2941 aggtcagaaa gccggaggag gtgcagttgc gtgcctggtt actccagttc ctgaaggcag
     3001 aggtgacacg acaggctgat gtgacgcgca tactgccgct gattaacgag ctggaagcgc
     3061 tgccaggaca gtgattgtat cgtccgctcg ccgcagtccc agcgaccgag cgttagcgag
     3121 cgagtgggcg aggaagcgga agtgaatccg tcgcctgatt gagcacatac gcacggtttt
     3181 tcgggaggtg atatgcgctg aacccgcatg aatactggat ttccacaggg ttggaggggg
     3241 tgtattcgga acttgcaatt ctgctttttt gcaacgcatt gtttttattg gttttttgtt
     3301 ttcagcactc caagttatcc acaggctcgt cgttaagttt ttagatcttg tttttaagat
     3361 cttgttttta atacttgttt tagcgccaaa attccttata gaaaacaaaa tgttacaacg
     3421 ctataggtga tatgatttaa ggtaaaggtg atataattta aggtgcttgg gtgaggtaat
     3481 ttaaggtaaa ggtgaggaga tttaaggtaa tattcacagg aaaatggggg gtgaaaatat
     3541 aattgctcac caatgctaaa ggtgataggt ttttatttca cctcattttt ggcctggtgg
     3601 ttaaaatgac atcaaaccct ctgatagcct ataagtccaa tgcgctggtt gaggccagtt
     3661 acaagctaac tttacaagaa cagcgtttct tattgctctg cataagccga cttaactccg
     3721 gtactgacgt agcttcacct gaattgcaaa agacaatgac cattacagct gcggaatatt
     3781 ttgattcatt ccctgatatg gggcggaaaa atgccgaggt tcagctacag gaagcgatcg
     3841 atcgtttgtg ggacaggtcg atcattctca aggacgacga gaagcgcgag gagttccgct
     3901 ggattcagta tcgggcacag tacgcgaggg gagaggggaa agcacaaatc actttttctg
     3961 acgcggtaat gccttatctg acacagttga aggggcaatt caccagagtc gtcattaaaa
     4021 atatttctaa tttatcaaga agttacagca taagaatata cgaaattctc cagcaattcc
     4081 gcagtac
//
