LOCUS       AP022442                4534 bp    DNA     circular BCT 09-OCT-2020
DEFINITION  Raoultella planticola STW0522-56 plasmid pSTW0522-56-4 DNA, complete
            sequence.
ACCESSION   AP022442
VERSION     AP022442.1
DBLINK      BioProject: PRJDB9036
            BioSample: SAMD00195896
            Sequence Read Archive: DRR199701
KEYWORDS    .
SOURCE      Raoultella planticola
  ORGANISM  Raoultella planticola
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Klebsiella/Raoultella group; Raoultella.
REFERENCE   1
  AUTHORS   Sekizuka,T., Katagiri,M., Asai,K. and Kuroda,M.
  TITLE     complete genome sequences of Raoultella planticola str. STW0522-56
            isolated from hospital sewage
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4534)
  AUTHORS   Sekizuka,T., Katagiri,M., Asai,K. and Kuroda,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-FEB-2020) Contact:Tsuyoshi Sekizuka National Institute
            of Infectious Diseases, Pathogen Genomics Center; 1-23-1 Toyama,
            Shinjuku-ku, Tokyo 162-8640, Japan
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method :: flye v. 2.5; minimap v. 0.2-r124; racon v. 1.1.0;
            circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v.
            20140604
            Genome Coverage       :: 477x
            Sequencing Technology :: Sequel; NextSeq 500
            ##Genome-Assembly-Data-END##
            Annotated by DFAST v.1.2.3 (https://dfast.nig.ac.jp).
FEATURES             Location/Qualifiers
     source          1..4534
                     /organism="Raoultella planticola"
                     /mol_type="genomic DNA"
                     /strain="STW0522-56"
                     /isolation_source="hospital sewage"
                     /db_xref="taxon:575"
                     /plasmid="pSTW0522-56-4"
                     /geo_loc_name="Japan:Tokyo"
                     /collection_date="2018-05-22"
     gene            complement(102..827)
                     /locus_tag="STW0522RAO56_P40010"
     CDS             complement(102..827)
                     /locus_tag="STW0522RAO56_P40010"
                     /inference="COORDINATES: ab initio
                     prediction:Prodigal:2.6.3"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="BBV79309.1"
                     /translation="MVTRRYLLGGEYPSEEFVQASLEKYFFRQGFDIDTGSYIDLICRD
                     KESRDVVWHIEVKGKTSQPGLDFRTCLGQLVQRMTKDNINYAIAVPRIKQYERLIEETS
                     ILAVSKLNLHWIFVGPDGSVTIKEPDSSTMKNGNGNGNGNGREVSLVNGGFKRFITGDF
                     MPTCSYGKAPVVFKSSRREMWDWLDDFVISNGVIPSIADIKKEAESRSGKWTLSNVKIE
                     YQFWKIYHLYKGHFFYQSE"
                     /name="hypothetical protein"
     gene            1055..2035
                     /gene="insH6"
                     /locus_tag="STW0522RAO56_P40020"
     CDS             1055..2035
                     /gene="insH6"
                     /locus_tag="STW0522RAO56_P40020"
                     /inference="COORDINATES: ab initio
                     prediction:Prodigal:2.6.3"
                     /inference="similar to AA sequence:UniProtKB:P0CE53"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase InsH for insertion sequence element
                     IS5H"
                     /protein_id="BBV79310.1"
                     /translation="MSHQLTFADSEFSSKRRQTRKEIFLSRMEQILPWQNMVEVIEPFY
                     PKAGNGRRPYPLETMLRIHCMQHWYNLSDGAMEDALYEIASMRRFARLSLDSALPDRTT
                     IMNFRHLLEQHQLARQLFKTINRWLAEAGVMMTQGTLVDATIIEAPSSTKNKEQQRDPE
                     MHQTKKGNQWHFGMKAHIGVDAKSGLTHSLVTTAANEHDLNQLGNLLHGEEQFVSADAG
                     YQGAPQREELAEVDVDWLIAERPGKVRTLKQHPRKNKTAINIEYMKASIRAKVEHPFRI
                     IKRQFGFVKARYKGLLKNDNQLAMLFTLANLFRADQMIRQWERSH"
                     /name="insH6"
     gene            complement(2235..2405)
                     /locus_tag="STW0522RAO56_P40030"
     CDS             complement(2235..2405)
                     /locus_tag="STW0522RAO56_P40030"
                     /inference="COORDINATES: ab initio
                     prediction:Prodigal:2.6.3"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="BBV79311.1"
                     /translation="MATATNFDAWLDDVDGDYEEVMALYDSVQNVSDMGLYQCVEGGRG
                     DAWVVSSNHHP"
                     /name="hypothetical protein"
     gene            complement(3256..3657)
                     /locus_tag="STW0522RAO56_P40040"
     CDS             complement(3256..3657)
                     /locus_tag="STW0522RAO56_P40040"
                     /inference="COORDINATES: ab initio
                     prediction:Prodigal:2.6.3"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="BBV79312.1"
                     /translation="MARVSISEAARLTGKSRTTLHRLIKTGDLSTCSGERNAKMVDTSE
                     LLRVFGPFEQPKGEHHSGQVSEQRDTASADQSEQVIRHLKQEIEHLNILLLSKDSHIDS
                     LKQAMLLLENHQAKLTESPAPWWKFWKKS"
                     /name="hypothetical protein"
     gene            complement(3657..3848)
                     /locus_tag="STW0522RAO56_P40050"
     CDS             complement(3657..3848)
                     /locus_tag="STW0522RAO56_P40050"
                     /inference="COORDINATES: ab initio
                     prediction:Prodigal:2.6.3"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="BBV79313.1"
                     /translation="MTKQQKTALNMAKFIQNQSLLLLEKLNELDLDVEADLCEELHDDA
                     EHLFRTLSSRLDALQDGN"
                     /name="hypothetical protein"
     Typing          4025..4409
                     /name="rep_cluster_2370"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="92.487"
                     /coverage="89.0"
                     /evalue="2.97e-154"
ORIGIN
        1 accacctccc caggtggttt tttcgttttc cgagaaagag attacgcttt gagcgaatga
       61 atctcaagaa gatcatggca tttgatgaac aaatgagtaa gctactcaga ttgatagaaa
      121 aaatgcccct tatacaagtg atatattttc caaaactgat actctatttt aacattagaa
      181 agcgtccatt tcccactccg cgattcagcc tcttttttaa tatcagcaat acttgggatc
      241 accccatttg aaataacaaa atcgtccaac caatcccaca tttctcgccg agatgattta
      301 aatacaacag gagctttccc atatgagcaa gttggcataa aatcccccgt aataaatctt
      361 ttaaaccccc cattcacaag agaaacttct cttccattac cattaccatt accattacca
      421 tttttcatcg tagagctatc aggttcctta attgtcacac tgccatcagg cccaacaaat
      481 atccagtgta aattcaattt actaacagca agaatgctcg tttcttctat taatctttca
      541 tactgtttta ttcttggaac agcaatagca taattaatat tatcttttgt cattctctgc
      601 actaattgtc caagacaagt tcgaaaatcc aaccccggct gtgatgtttt tccttttact
      661 tcaatatgcc acacaacatc cctagattct ttatcacgac aaataaggtc aatataagaa
      721 cccgtatcta tatcgaaccc ttgtcgaaaa aaatattttt ctaaagaagc ttgaacaaat
      781 tcctcggagg gatattcacc acctagtaag taccttctcg tcaccataag agccacaacc
      841 cctacgcatc ctatttacta taacgtcata ttttaagagt tcccacaagg ggaactctct
      901 gtacgattac gagtgatcat tcgatatatt tcgttgaaat ccataccatg aatcaacatc
      961 ttcgccgcca catagccttt ctctaaggaa ggtgcgaaca agtccctgat atgagatcat
     1021 gtttgtcatc tggagccatg gaacagggtt catcatgagt catcaactta ccttcgccga
     1081 cagtgaattc agcagtaagc gccgtcagac cagaaaagag attttcttgt cccgtatgga
     1141 gcagattctg ccatggcaaa acatggtgga agtcatcgag ccgttttacc ccaaggctgg
     1201 taatggccgg cgaccttatc cgctggaaac catgctacgc attcactgca tgcagcattg
     1261 gtacaacctg agcgatggcg cgatggaaga tgctctgtac gaaatcgcct ccatgcgtcg
     1321 gtttgcccgg ttatccctgg atagcgcctt gcctgaccgc accaccatca tgaatttccg
     1381 ccacctgctg gagcagcatc aactggcccg ccaattgttc aagaccatca atcgctggct
     1441 ggccgaagca ggcgtcatga tgactcaagg caccttggtc gatgccacca tcattgaggc
     1501 acccagctct accaagaaca aagagcagca acgcgatccg gagatgcatc agaccaagaa
     1561 aggcaatcag tggcactttg gcatgaaggc ccacattggt gtcgatgcca agagtggcct
     1621 gacccacagc ctagtcacca ccgcggccaa cgagcatgac ctcaatcagc tgggtaatct
     1681 gctgcatgga gaggagcaat ttgtctcagc cgatgccggc taccaagggg cgccacagcg
     1741 cgaggagctg gccgaggtgg atgtggactg gctgatcgcc gagcgccccg gcaaggtaag
     1801 aaccttgaaa cagcatccac gcaagaacaa aacggccatc aacatcgaat acatgaaagc
     1861 cagcatccgg gccaaggtgg agcacccatt tcgcatcatc aagcgacagt tcggcttcgt
     1921 gaaagccaga tacaaggggt tgctgaaaaa cgataaccaa ctggcgatgt tattcacgct
     1981 ggccaacctg tttcgggcgg accaaatgat acgtcagtgg gagagatctc actaaaaact
     2041 ggggataacg ccttaaatgg cgaagaaacg gtctaaatag gctgattcaa ggcatttacg
     2101 ggagaaaaaa tcggctcaaa catgaagaaa tgaaatgact gagtcagccg agaagaattt
     2161 ccccgcttat tcgcaccttc cctaatcaat ttgaggaaag tatccctagc cacagctgat
     2221 gctagaaaaa gagcttatgg atgatgatta gagctcacga cccaagcatc accccgacca
     2281 ccctcaacac actgatacaa ccccatatca cttacattct gaacggaatc ataaagagcc
     2341 ataacctcct cataatcgcc atcaacatca tctaaccacg catcaaaatt agtagcagtc
     2401 gccatgccaa tcctccattt tttagttttc aggagttaat ttacatagtg ataggggctg
     2461 ttaagcaaat aagtttttac cttttttgcc tcatgctcta aaagtgagca agacaggcat
     2521 ttaccataac gtcccattgt acgcaccgct aaaacggcct cagggcgttt ctgacgggaa
     2581 accggtaaaa caggcaacaa accacccgaa aacccgccag aaacgcgcag gctctgtttt
     2641 tacggcatgc atgagtatgc acgcaagtgc atagcgcgaa aattcacgcc attcagccag
     2701 ggtaagtcct gtttccggcg tacttcccat ccgaaaacgg tgaacgggga cgcaatttat
     2761 tgcgtggccg tgaagcgttg ccggcgcagc cggaaaaccg gttttcagca cgttcaggaa
     2821 tccggttcgt cgacggccgg caatcacgtt atggcaagtc accgaacgac tcaccacacg
     2881 attcaccggc gactcttcac tagagtcgta cccagagtcg ccacgcctaa aaaacaacca
     2941 aacggggagt cgggtctaga gtcgggtcgt tattaactca ttgtttttat agtcctgagt
     3001 cgttaccgac tctatgacga ctcgccgggg actctatgac gagtcgtcat agagtcggat
     3061 ctatataaat caaatttaaa aaacgaaatt ttacagactt aaactactga tattaaatac
     3121 aaatccgcaa aattttaatt ttgcgtagtg tgtggatatt tttagtggtg aggagcgttc
     3181 agaaatccgg cgattttttg gaaggttcag gaactccccg ggatggccgg agaggaaaac
     3241 ggaagcatga cggggtcagg attttttcca gaatttccac catggcgccg gggattcagt
     3301 taattttgcc tggtgatttt caagaaggag catggcctgt ttcaggctgt caatgtgcga
     3361 atccttggac aaaagtaaga tattcaggtg ttcaatctcc tgtttcagat gacgaatcac
     3421 ctgttcactc tggtcagcag aggctgtatc acgctgttcg gagacctgtc cagaatggtg
     3481 ttcacccttc ggttgctcaa agggaccaaa gacacgtaaa agctctgaag tatctaccat
     3541 ttttgcattg cgctcaccac tacaggtgga caggtcacct gttttaatta acctgtgcag
     3601 tgttgttcta ctcttacccg tcagtcgggc agcctcacta atagacactc tggccatcag
     3661 ttaccatcct gtaatgcatc cagtctcgag gacagtgtac ggaaaagatg ctccgcatca
     3721 tcgtggagtt cctcacaaag gtcggcctcg acatcgagat caagctcgtt aagcttctcc
     3781 agcaggagca gagactgatt ctggatgaat ttagccatgt tcagcgctgt tttctgttgt
     3841 ttcgtcataa gaggcctcag agcgtcagtg ctcaatgtag ggatgttctc ttttccgctt
     3901 cctcgctcac tcagtcgcta cgctcctgcc gttcggctgc ggcgagcggc aggagcatgc
     3961 gtataaaagc tcgagaaaac cgagcgatcg cgtgatgggg agaaggagag gccgcacagc
     4021 ggccgttttt ccataggctc cgccccccct gacaagcatc acagaaactg acgctcaaat
     4081 cagtggtggc gaaacccgac aggactataa agatatcagg cgtttccccc tgatggctcc
     4141 ctcgtgcgct ctcctgttcc gaccctgccg cttaccagat acctgtccgc ctttctccct
     4201 tcgggaagcg tggcgctttc tcatagctca cgctgttggt atctcagttc ggtgtaggtc
     4261 gttcgctcca agctgggctg tgtgcacgaa ccccccgttc agcccgaccg ctgcgcctta
     4321 tccggtaact atcgtcttga gtccaacccg gtaagacacg actaatcgcc attgacaacg
     4381 gccactggta gacaggatgt gcgagagatg tatcgagagt tcttgaagtg gtggcctgac
     4441 tgcggctaca ctgaaaggac agatttggtg acatgtctcg cacaagactg ttaccacggt
     4501 tcagaagttc cccaacttac tgaaccttcg aaaa
//
