LOCUS       AP022441                5711 bp    DNA     circular BCT 09-OCT-2020
DEFINITION  Raoultella planticola STW0522-56 plasmid pSTW0522-56-3 DNA, complete
            sequence.
ACCESSION   AP022441
VERSION     AP022441.1
DBLINK      BioProject: PRJDB9036
            BioSample: SAMD00195896
            Sequence Read Archive: DRR199701
KEYWORDS    .
SOURCE      Raoultella planticola
  ORGANISM  Raoultella planticola
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Klebsiella/Raoultella group; Raoultella.
REFERENCE   1
  AUTHORS   Sekizuka,T., Katagiri,M., Asai,K. and Kuroda,M.
  TITLE     complete genome sequences of Raoultella planticola str. STW0522-56
            isolated from hospital sewage
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5711)
  AUTHORS   Sekizuka,T., Katagiri,M., Asai,K. and Kuroda,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-FEB-2020) Contact:Tsuyoshi Sekizuka National Institute
            of Infectious Diseases, Pathogen Genomics Center; 1-23-1 Toyama,
            Shinjuku-ku, Tokyo 162-8640, Japan
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method :: flye v. 2.5; minimap v. 0.2-r124; racon v. 1.1.0;
            circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v.
            20140604
            Genome Coverage       :: 477x
            Sequencing Technology :: Sequel; NextSeq 500
            ##Genome-Assembly-Data-END##
            Annotated by DFAST v.1.2.3 (https://dfast.nig.ac.jp).
FEATURES             Location/Qualifiers
     source          1..5711
                     /organism="Raoultella planticola"
                     /mol_type="genomic DNA"
                     /strain="STW0522-56"
                     /isolation_source="hospital sewage"
                     /db_xref="taxon:575"
                     /plasmid="pSTW0522-56-3"
                     /geo_loc_name="Japan:Tokyo"
                     /collection_date="2018-05-22"
     gene            complement(102..467)
                     /locus_tag="STW0522RAO56_P30010"
     CDS             complement(102..467)
                     /locus_tag="STW0522RAO56_P30010"
                     /inference="COORDINATES: ab initio
                     prediction:Prodigal:2.6.3"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="BBV79303.1"
                     /translation="MVVDDLSHVESFVTVGERGEVINLDADGNELHTPDSYREKLKIER
                     GELQASLEKAKEEINSIDNDITSQKIKNQLSAALSQPMDAEGEWNTKRILQGVLDLSKQ
                     VGCGVLTAAITHYLGVS"
                     /name="hypothetical protein"
     gene            598..1578
                     /gene="insH6"
                     /locus_tag="STW0522RAO56_P30020"
     CDS             598..1578
                     /gene="insH6"
                     /locus_tag="STW0522RAO56_P30020"
                     /inference="COORDINATES: ab initio
                     prediction:Prodigal:2.6.3"
                     /inference="similar to AA sequence:UniProtKB:P0CE53"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase InsH for insertion sequence element
                     IS5H"
                     /protein_id="BBV79304.1"
                     /translation="MSHQLTFADSEFSSKRRQTRKEIFLSRMEQILPWQNMVEVIEPFY
                     PKAGNGRRPYPLETMLRIHCMQHWYNLSDGAMEDALYEIASMRRFARLSLDSALPDRTT
                     IMNFRHLLEQHQLARQLFKTINRWLAEAGVMMTQGTLVDATIIEAPSSTKNKEQQRDPE
                     MHQTKKGNQWHFGMKAHIGVDAKSGLTHSLVTTAANEHDLNQLGNLLHGEEQFVSADAG
                     YQGAPQREELAEVDVDWLIAERPGKVRTLKQHPRKNKTAINIEYMKASIRAKVEHPFRI
                     IKRQFGFVKARYKGLLKNDNQLAMLFTLANLFRADQMIRQWERSH"
                     /name="insH6"
     gene            complement(2535..2945)
                     /locus_tag="STW0522RAO56_P30030"
     CDS             complement(2535..2945)
                     /locus_tag="STW0522RAO56_P30030"
                     /inference="COORDINATES: ab initio
                     prediction:Prodigal:2.6.3"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="BBV79305.1"
                     /translation="MARVSISEAARLVKVSRPTIYKMINSGKLSYTSVVKHGKIIKVID
                     TSELIRVFGSLDGVIDTVKSDAGSTGVNSVGLHDLQHRIALLEAENDGLKGAVKARDEH
                     IDSLRQAMQLLEHKHEPSSPPDSPWWKFWKKS"
                     /name="hypothetical protein"
     gene            complement(2945..3136)
                     /locus_tag="STW0522RAO56_P30040"
     CDS             complement(2945..3136)
                     /locus_tag="STW0522RAO56_P30040"
                     /inference="COORDINATES: ab initio
                     prediction:Prodigal:2.6.3"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="BBV79306.1"
                     /translation="MTKQQKTALNMAKFIQNQSLLLLEKLNELDLDAEADLCEKLHDDA
                     EHLFRTLSSRLDELQDGN"
                     /name="hypothetical protein"
     gene            complement(3965..4321)
                     /gene="ybaQ"
                     /locus_tag="STW0522RAO56_P30050"
     CDS             complement(3965..4321)
                     /gene="ybaQ"
                     /locus_tag="STW0522RAO56_P30050"
                     /inference="COORDINATES: ab initio
                     prediction:Prodigal:2.6.3"
                     /inference="similar to AA sequence:UniProtKB:P0A9T6"
                     /codon_start=1
                     /transl_table=11
                     /product="putative HTH-type transcriptional regulator YbaQ"
                     /protein_id="BBV79307.1"
                     /translation="MSQATRKPSTVGDIILYEYLEPSGLKINDLAEMLNVHRNSASALV
                     NNNRKLSTDMAFRLAKAFDTTAKFWLNIQQSVDLWEVTSSPRLQEEIERVTPAHEIIER
                     KHNAESLEKKHAVA"
                     /name="ybaQ"
     gene            complement(4525..4845)
                     /locus_tag="STW0522RAO56_P30060"
     CDS             complement(4525..4845)
                     /locus_tag="STW0522RAO56_P30060"
                     /inference="COORDINATES: ab initio
                     prediction:Prodigal:2.6.3"
                     /inference="similar to AA sequence:UniProtKB:P44138"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="BBV79308.1"
                     /translation="MQQNHDSDDDCRIQFRDDWLYQFYKYGKANRKIPATISVSLGRKL
                     DMLNAADKIGDLRSPPGNRFENLNPPLAGYSSIRVNDKYRLIFKWGENGVEDLYLDPHD
                     YR"
                     /name="hypothetical protein"
     Typing          3256..3665
                     /name="ColRNAI_rep_cluster_1987"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="100.0"
                     /coverage="100.0"
                     /evalue="0.0"
ORIGIN
        1 cgaatccgtt gcaagatgag acacacaaga aaagagctag acgaaggtcg ctccgctccc
       61 catggttttt gtatacccac catgggggca taggtagttt attaactaac tccaagataa
      121 tgcgtgatcg cagccgtgag tacaccacag cccacttgtt tagataaatc taaaacccct
      181 tgtaggattc tcttagtgtt ccactcacct tctgcatcca ttggttgaga tagtgcagca
      241 ctcaactggt tcttaatctt ttgcgaagtt atatcgttat ctattgagtt gatttcctcc
      301 ttggctttct ccaaggaagc ctggagttca ccgcgttcta tttttaactt ttcacgataa
      361 ctgtctggtg tgtgtagttc gttcccatcc gcatcgagat taataacttc gcctcgctca
      421 ccaacagtaa caaagctctc tacgtgagac agatcatcaa caaccatcac attccttttc
      481 attcttaaac cagtcacttt tgcacctgca ccgatcttca taaaactaag gaaggtgcga
      541 acaagtccct gatatgagat catgtttgtc atctggagcc atggaacagg gttcatcatg
      601 agtcatcaac ttaccttcgc cgacagtgaa ttcagcagta agcgccgtca gaccagaaaa
      661 gagattttct tgtcccgtat ggagcagatt ctgccatggc aaaacatggt ggaagtcatc
      721 gagccgtttt accccaaggc tggtaatggc cggcgacctt atccgctgga aaccatgcta
      781 cgcattcact gcatgcagca ttggtacaac ctgagcgatg gcgcgatgga agatgctctg
      841 tacgaaatcg cctccatgcg tcggtttgcc cggttatccc tggatagcgc cttgcctgac
      901 cgcaccacca tcatgaattt ccgccacctg ctggagcagc atcaactggc ccgccaattg
      961 ttcaagacca tcaatcgctg gctggccgaa gcaggcgtca tgatgactca aggcaccttg
     1021 gtcgatgcca ccatcattga ggcacccagc tctaccaaga acaaagagca gcaacgcgat
     1081 ccggagatgc atcagaccaa gaaaggcaat cagtggcact ttggcatgaa ggcccacatt
     1141 ggtgtcgatg ccaagagtgg cctgacccac agcctagtca ccaccgcggc caacgagcat
     1201 gacctcaatc agctgggtaa tctgctgcat ggagaggagc aatttgtctc agccgatgcc
     1261 ggctaccaag gggcgccaca gcgcgaggag ctggccgagg tggatgtgga ctggctgatc
     1321 gccgagcgcc ccggcaaggt aagaaccttg aaacagcatc cacgcaagaa caaaacggcc
     1381 atcaacatcg aatacatgaa agccagcatc cgggccaagg tggagcaccc atttcgcatc
     1441 atcaagcgac agttcggctt cgtgaaagcc agatacaagg ggttgctgaa aaacgataac
     1501 caactggcga tgttattcac gctggccaac ctgtttcggg cggaccaaat gatacgtcag
     1561 tgggagagat ctcactaaaa actggggata acgccttaaa tggcgaagaa acggtctaaa
     1621 taggctgatt caaggcattt acgggagaaa aaatcggctc aaacatgaag aaatgaaatg
     1681 actgagtcag ccgagaagaa tttccccgct tattcgcacc ttccctaaag cctgatttat
     1741 cgttcactca catcacctca taagataaaa atgttaataa cgttttcacg agcaattatt
     1801 taccataacg cctcattacg cgcaccgcta aaacggcctc agggcgtttc tgacgggaaa
     1861 ccggtaaaac aggcaacaaa ccacccgaaa acccgccaga aacgcgcagg ctctgttttt
     1921 acggcatgca tgagtatgcg cgcaagtgca tagcgcggaa attgacacca ttcagccagg
     1981 ggaagtcctg tttccggcgt tcttcctatc cgaaaacggt gaacggggac gcaatttatt
     2041 gcgtggccgt gaagcgttgc cggcgcagcc ggaaaaccga ttttcaacac gatcagaaat
     2101 cgggttcgtc gacggccggc aatcacgtta tggcaagtcg ccggacgact cactacacga
     2161 ttcaccggcg attcgactcg tgacttgact ctagagtcgt caaggtcaaa aaaacaccaa
     2221 aatgacgatt cgactctaga gtcaagtcgt cataagttac tgatagtctt aagtgagtcg
     2281 tcgatgactc tatgacgagt cgtcggcaag tcgtacacga atcgccgacg acttggattc
     2341 accttacaga aagtaatact gcgtaatgta ataacccaca actaactgat attaatgaat
     2401 tatcttcaaa attttaattt tgcgtggggt gtgggtattt ttagtggtga ggagcgttca
     2461 gagatctggc gatttttggg aaggttcagg aactccccgg gatggccgga gaggaaaacg
     2521 gaagcatgac ggagtcagga ttttttccag aatttccacc acggggaatc gggtggtgaa
     2581 gaaggttcgt gcttgtgctc cagaagctgc atagcctgac gaagggaatc aatatgctca
     2641 tctcgagcct taacagcccc tttaagacca tcgttttcag cttctagtaa agcaattcta
     2701 tgttgtaaat catgtaaacc aacgctgtta acacctgtag atcctgcgtc actttttaca
     2761 gtatcgatga caccatcaag agaaccaaaa actctaataa gctctgaagt atcaataact
     2821 ttaatgatct tcccgtgctt tacaacagag gtgtaactta acttcccact gttaatcatc
     2881 ttgtaaattg tggggcgact aaccttaaca agccgtgccg cttcactaat agacactctg
     2941 gccatcagtt accatcctgt aattcatcca gtctcgagga cagtgtacgg aaaagatgct
     3001 ccgcatcatc gtggagtttc tcacaaaggt cggcctctgc atcaagatca agctcgttaa
     3061 gcttctccag caggagcaga gactgattct ggatgaattt agccatgttc agcgctgttt
     3121 tctgttgttt cgtcataaga agcctcagag cgtcagtgct cagtgtaaaa ccagtctctt
     3181 ttccgcttcc tcgctcactc agtcgctacg ctcctgccgt tcggctgcgg cgagcggtag
     3241 gactatgcgt ataaatgctc gagaaaaccg agcggacgcg tgatgggcag aaggaaaggc
     3301 cgcttagcgg ccgtttttcc ataggctccg cccccctgac aagcatcata gaaattgacg
     3361 ctcaaatcag tggtggcgaa acccgacagg actataaaga tatcaggcgt ttccccctga
     3421 tggctccctc gtgcgctctc ctgttcctgc cattcggttt accggtgtca ttccgctgtt
     3481 atggccgcgt ttatctcatt ccacgccaga cactcagttc cgggaaggca gttcgctcca
     3541 agctggactg tatgcacgaa ccccccgttc agtccgactg ctgcgtctta tccggtaact
     3601 atcgtcttga gtccaacccg gtaagacatg caaaagcgcc actggcagca gccactggta
     3661 actgatttag aggagttagt cttgaagtca tgcgcctgtt aaggctaaac tgaaagaaca
     3721 agttttggtg actgcgctcc tccaagccag ttaccttggt tcaatcacct gcaagtgttt
     3781 gaaccttcgg aaaaaccgcc ctgcaaggcg gttttttcgt ttacagagca agagattacg
     3841 cgtaccgaaa ccggatctca agtgctcgta aaagaaaatg atgatgacct ttagcggtta
     3901 caaaaaaaga aggcacacta ttacagaggc cttcttctag tttggttaaa tttttttaaa
     3961 aaaatcatgc gaccgcatgt tttttttcca aagattcagc attgtgcttc ctttctataa
     4021 tttcatgagc gggagtgact ctttctattt cttcctgaag gcgtgggctg ctcgtaacct
     4081 cccacaaatc aacagactgc tgtatattta accagaactt agcggtggta tcgaatgctt
     4141 tagctaaccg aaacgccata tcggtagaca gtttcctatt attgttaacc aaagcacttg
     4201 cagaatttct atgcacgttt aacatttcag ccaagtcatt gatttttaaa ccacttggct
     4261 cgagatattc ataaagaata atatctccta cagtcgatgg ttttctggtt gcttgggaca
     4321 tgctttactc ctgaattggt cgcttctctc tgttagatga ggaagataag tatttcttct
     4381 gttaccagct gtatcgatta gtaattatct taaatatagt tacgtcgcgt tactttatta
     4441 atcattattt gtgatgacgt tttaacgtag gtgaggaaat gcctcaccta cttgttttgt
     4501 aagataacag ttccggtctg ttacctatcg gtaatcatgt ggatcgagat acaaatcctc
     4561 gactccgttc tcaccccact taaatatcaa gcggtactta tcattcaccc ttatagatga
     4621 ataccctgcc aatggagggt tgagattttc aaatcggttc cccgggggag accgtaaatc
     4681 tccaatttta tcagcagcat tcagcatatc cagcttgcga cctaatgaaa cactaatcgt
     4741 agctggaatt tttcgattgg ctttaccgta tttataaaac tggtatagcc aatcgtctcg
     4801 gaactgaatg cggcaatcat catcactatc atgattttgc tgcatttttc ttttacctca
     4861 aatgttgccg caacttggca agttctagat caccttttac caccaccata gtacaacaaa
     4921 cgccagaaat gcacaatagc actgtgcact tgtgcaaaaa aacataatga tataaaatgc
     4981 acaaaagcac agtgctactg tgcaaaaaaa agaatagttg gaggtcatat ggcgcttgtt
     5041 cgctcaggaa ataaaaccaa gatttttgaa gcagatccga aatttaaccc agtttttgat
     5101 acacaacaca agcctggcga tacgtgcacg tatgaaggaa tttacaaatg cacaggttgc
     5161 ggtaaagaag taactatcgc aggagggaaa acacttccac cacaaaatca tcatcaacat
     5221 agtcccggac agggggacat ccgctggcaa ctatttgttt atgcagagtg aggtatgaaa
     5281 atggcagacc gtagaccact taacccgcat gtcgtcgtcc ctaaaccagg aggcggaact
     5341 cagccacgag atcgtaataa taatggaaga gtccgagaga aacgttcaga tgcgggaaaa
     5401 tcaagaaaat aagaaaagcc gccaaatagg ggtcagtttg gatatcggaa acttttgtac
     5461 gttaagcgca ttatttaacc aatattgatg cgtaagggat tgattttgcc tcagctacga
     5521 tcgcttttaa gtcaccgctc tttctgtatc gcatttaggt tatccgatta aggaaaattc
     5581 acgggaaacg gcgtatagcg cgggagtaca tcattgcgag aggtaagcct gttcaaaaca
     5641 caggcttacc gtacaataat tctctatatc caaactgacc ccaagaagtc tgacactaac
     5701 cccacacaaa t
//
