LOCUS       AP022440                6753 bp    DNA     circular BCT 09-OCT-2020
DEFINITION  Raoultella planticola STW0522-56 plasmid pSTW0522-56-2 DNA, complete
            sequence.
ACCESSION   AP022440
VERSION     AP022440.1
DBLINK      BioProject: PRJDB9036
            BioSample: SAMD00195896
            Sequence Read Archive: DRR199701
KEYWORDS    .
SOURCE      Raoultella planticola
  ORGANISM  Raoultella planticola
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Klebsiella/Raoultella group; Raoultella.
REFERENCE   1
  AUTHORS   Sekizuka,T., Katagiri,M., Asai,K. and Kuroda,M.
  TITLE     complete genome sequences of Raoultella planticola str. STW0522-56
            isolated from hospital sewage
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6753)
  AUTHORS   Sekizuka,T., Katagiri,M., Asai,K. and Kuroda,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-FEB-2020) Contact:Tsuyoshi Sekizuka National Institute
            of Infectious Diseases, Pathogen Genomics Center; 1-23-1 Toyama,
            Shinjuku-ku, Tokyo 162-8640, Japan
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method :: flye v. 2.5; minimap v. 0.2-r124; racon v. 1.1.0;
            circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v.
            20140604
            Genome Coverage       :: 477x
            Sequencing Technology :: Sequel; NextSeq 500
            ##Genome-Assembly-Data-END##
            Annotated by DFAST v.1.2.3 (https://dfast.nig.ac.jp).
FEATURES             Location/Qualifiers
     source          1..6753
                     /organism="Raoultella planticola"
                     /mol_type="genomic DNA"
                     /strain="STW0522-56"
                     /isolation_source="hospital sewage"
                     /db_xref="taxon:575"
                     /plasmid="pSTW0522-56-2"
                     /geo_loc_name="Japan:Tokyo"
                     /collection_date="2018-05-22"
     gene            101..424
                     /locus_tag="STW0522RAO56_P20010"
     CDS             101..424
                     /locus_tag="STW0522RAO56_P20010"
                     /inference="COORDINATES: ab initio
                     prediction:Prodigal:2.6.3"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="BBV79294.1"
                     /translation="MLTMWVTEDEHRRLLERCDGRQLAAWMRQTCLDEKPARSGKLPSI
                     SPALLRQLAGMGNNLNQIARRVNAGGGTGHDRVQIVAALMAIDAGLERLRHAVLEKGTD
                     DDR"
                     /name="hypothetical protein"
     gene            1102..1593
                     /locus_tag="STW0522RAO56_P20020"
     CDS             1102..1593
                     /locus_tag="STW0522RAO56_P20020"
                     /inference="COORDINATES: ab initio
                     prediction:Prodigal:2.6.3"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="BBV79295.1"
                     /translation="MSSLLTLAKDLEQQSKAQKQSTGEMLKAAFSEHEQSVRAELSASA
                     RRISDAILAHEQSMSEAMEKNRRSVLRTAGRTWLTILMVSALLIGTSGSILWWQGQQIT
                     DNYTHLRQQEDTLAKMTARTWGVRYQESSDGRRFLILPPGMQTEAIPYDGTTWIRLKQE
                     "
                     /name="hypothetical protein"
     gene            1600..1815
                     /locus_tag="STW0522RAO56_P20030"
     CDS             1600..1815
                     /locus_tag="STW0522RAO56_P20030"
                     /inference="COORDINATES: ab initio
                     prediction:Prodigal:2.6.3"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="BBV79296.1"
                     /translation="MTELEKQLLSALEQLQQDYSQRLDEWESAFAEWRSMCGLMQRENA
                     VLNERVSDLSTQVLSLSEQLRRLSGN"
                     /name="hypothetical protein"
     gene            2003..2122
                     /locus_tag="STW0522RAO56_P20040"
     CDS             2003..2122
                     /locus_tag="STW0522RAO56_P20040"
                     /inference="COORDINATES: ab initio
                     prediction:Prodigal:2.6.3"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="BBV79297.1"
                     /translation="MKILNVIEALLNCFYLVMELCELPERHLPVFKAFALILV"
                     /name="hypothetical protein"
     gene            complement(2295..2441)
                     /locus_tag="STW0522RAO56_P20050"
     CDS             complement(2295..2441)
                     /locus_tag="STW0522RAO56_P20050"
                     /inference="COORDINATES: ab initio
                     prediction:Prodigal:2.6.3"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="BBV79298.1"
                     /translation="MKNDSLENVIHEADTREKHLFRYWRWCLKWGIWFMLALYLLWCYI
                     TSF"
                     /name="hypothetical protein"
     gene            complement(2431..2919)
                     /locus_tag="STW0522RAO56_P20060"
     CDS             complement(2431..2919)
                     /locus_tag="STW0522RAO56_P20060"
                     /inference="COORDINATES: ab initio
                     prediction:Prodigal:2.6.3"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="BBV79299.1"
                     /translation="MRHTGDTVIFMAWHTVKDTLKLTGRSRSQLYRDMKKGLVSYRTGK
                     DGRREFDTCELIRAYGELRTEETVKRHKKGQQEIDDTPAEHPQLKEIQQQLTALQQTVT
                     LMLEDKSTREAELRQHDEERTQLLAEISRLNEDLEQEKKRSLWSRLFRRDIEEKNREK"
                     /name="hypothetical protein"
     gene            3176..3679
                     /locus_tag="STW0522RAO56_P20070"
     CDS             3176..3679
                     /locus_tag="STW0522RAO56_P20070"
                     /inference="COORDINATES: ab initio
                     prediction:Prodigal:2.6.3"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="BBV79300.1"
                     /translation="MPGFNYGGNSVGDGTNWSSERGSDPTTPGGGDNGHAGDHSSSGSS
                     SSTVEHTPWGDLTTDAAGYAYMNGIKLTADNSQLAYVSPTHLVRVLNSLLDRSYMKPEP
                     GEHAGVTGVPATSPSRVTLADNALKNAQSKAQDAAAALSKANAAISQAQSVRGRCGLSI
                     TPSR"
                     /name="hypothetical protein"
     gene            complement(3656..5347)
                     /locus_tag="STW0522RAO56_P20080"
     CDS             complement(3656..5347)
                     /locus_tag="STW0522RAO56_P20080"
                     /inference="COORDINATES: ab initio
                     prediction:Prodigal:2.6.3"
                     /inference="similar to AA sequence:RefSeq:WP_000893345.1"
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="BBV79301.1"
                     /translation="MSERYRAAVDAAAIFSETDKSGIITYVNEQFCDISGYSAQELIGQ
                     NHRILNSGYHPPEFFIDMWKKISRGQVWKGEICNRKKDGSLYWVESTIVPMYDYASQRV
                     QKYVSIRFDVTEKRKFLETLQWQAEHDELTGLPNRFLLSKALDQAIVKAKSQPSTVAVG
                     VLDLDGFKQINDGYGHEMGDRLLVAVADRLKHSMHIEDTVARFGGDEFVLILGVRDPKV
                     LESALQRLLAALSAVYIIDGIDINISASIGVTLYPNDNENADTLLRHADQAMYKAKQSG
                     RNCFHLFDVSKDKMDKSAFDTVIRVRQALHDGELCLHYQPKISLSSGAVIGFEALLRWQ
                     HPRDGLILPQYFIPLIEQSDLIVEIGEWVIDQALSQIEQWADLGHSWSVSVNIAALHLK
                     KENFVKSLKFLLDSHPNVLPQMLDIEITESVEIEHLPHVTQCLIACQDLGVTFSLDDFG
                     TGYSSLSYLKQLPTQSIKIDKSFIRDILIDKDSLRLTKAIIGLAKSFNREVIAEGVETV
                     EHEVLLMNLGCDVAQGYGIATPMPVEKVLSWVAKFVPAHLSRGGNR"
                     /name="GGDEF domain-containing protein"
     gene            complement(5384..5575)
                     /locus_tag="STW0522RAO56_P20090"
     CDS             complement(5384..5575)
                     /locus_tag="STW0522RAO56_P20090"
                     /inference="COORDINATES: ab initio
                     prediction:Prodigal:2.6.3"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="BBV79302.1"
                     /translation="MSQQMAAASEEQASVAEDIARQINNVAGTVERTAKNANSAVIRGR
                     ELESTSRGFNSLVERFNR"
                     /name="hypothetical protein"
     Typing          6568..6741
                     /name="MOBP"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="96.571"
                     /coverage="100.0"
                     /evalue="2.6e-76"
     Typing          complement(6097..6644)
                     /name="rep_cluster_2335"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="93.829"
                     /coverage="90.0"
                     /evalue="0.0"
     Typing          415..1913
                     /name="MOBP"
                     /typing="relaxase"
                     /tool="MOB-suite"
                     /identity="91.089"
                     /coverage="100.0"
                     /evalue="0.0"
ORIGIN
        1 gacgcgcctg cggcttgtcc aaccccgcgc cgaccgggaa agcctttccc gtccgtcccg
       61 gtgttatcag gaggccggtt tgtcagagaa acggaacaag atgctcacca tgtgggtgac
      121 ggaggacgag caccggcggc tgctcgagcg ctgcgacggc aggcagctgg cagcgtggat
      181 gaggcagacc tgcctggacg aaaagccagc acgttccgga aagcttccct caatctcgcc
      241 ggcgctgctg cgccagcttg ccggcatggg caataacctg aaccagatag cccgccgtgt
      301 taacgccggc ggcggcaccg gccatgacag ggtacagatt gtggcggcgc tgatggccat
      361 cgatgccggg cttgagcggc tgcggcacgc cgttcttgag aaaggaacgg acgatgatcg
      421 ttaaatttca tccgcgcggc cgcggcggtg gcgccgggcc ggtggactat ctgctgggta
      481 aagaccggca gcgtgaaggc gccaccgtcc tgcaggggaa gccggaagaa gtccgggagc
      541 tgattgacgc gtcgccttac gtgaagaaat acacttccgg cgtcctgtcg tttgcggagg
      601 ccgatctgcc tcccggccag cgggaaaaac tgatggccag cttcgagcgg gttctgatgc
      661 ccggactcga taaagatcag tacagcattc tgtgggtgga gcacgaggac aaggggcgtc
      721 tggagctgaa ctttctgatc cccaataccg agctgctgac cggcaggcgg ctccagccgt
      781 actacgatcg cgccgaccgg ccgcgcatcg atgcctggca gaccatcgtg aacggcagac
      841 tggggctgca cgacccgaac gcgccggaaa accgccgggc gctggtcacg ccgtccggac
      901 tgccgaaaac gaagcaggag gccgcagaag ccatcacgcg cggactgctg acccttgctt
      961 cgtccgggga gctgaaaagc cgtcaggacg tcactgaggc gctggaacgg tcaggttttg
     1021 aggtggtgcg caccacgaaa agcagtatca gcattgccga cccggacggg gggcgaaaca
     1081 tccgactgaa gggagccatc tatgagcagt cttttaacgc tggcgaagga cttagagcag
     1141 caatcgaaag cgcagaagca gagtaccggc gagatgctga aagccgcatt cagcgagcac
     1201 gagcagtctg tcagagcgga actgagcgca agcgcgagga gaatcagcga cgccatcctc
     1261 gcccacgagc agagtatgag cgaggcgatg gagaaaaacc ggcggagcgt gctgcggact
     1321 gccgggcgga catggctcac catcctgatg gtgtcagcgc tgctgatcgg cacgagcggg
     1381 agcatactgt ggtggcaggg gcagcagata accgacaatt acacgcatct tcgtcagcag
     1441 gaagataccc tggcgaaaat gaccgcccgg acgtggggag tgcgctatca ggagagcagc
     1501 gacggccgga ggtttcttat cctgccgccg gggatgcaaa ccgaagccat cccttacgac
     1561 gggacgacat ggatccgcct gaaacaggag tagcggaaga tgacagagct ggaaaagcag
     1621 ttgctgagcg cattagagca gctacagcag gactactcgc aaaggctgga cgaatgggag
     1681 agcgccttcg cggaatggcg gagcatgtgt gggcttatgc aacgggagaa cgcggtgctg
     1741 aacgagcgcg tgtcggactt gagcacgcag gtgctgagtt taagcgagca gctgcgccgc
     1801 ttgtccggga actgaatgcc atcgaggaga aggctgtact ggagtatcag cgtcagaacg
     1861 agctggagct gacgctccga cagaagcaga agagtttcga tggtccgaag atgaggtgac
     1921 agcccgcacg aagaagggct catcgcgttc ctgctaaata ggctgactac cggaatggta
     1981 gtgacttatc ccggaggaag tgatgaaaat tctcaacgtt attgaagccc tgctgaactg
     2041 tttttacctg gtgatggagc tgtgtgagtt gccggagagg catttgccgg tttttaaggc
     2101 gttcgcgctg attttagtgt gactttacgc gccatgcatc tggctgcatg actatgcatc
     2161 agtgtaatat ccagcggctg cgttttcggt gttttttcgt catgtctgtc gccactttct
     2221 cgcgtctggc accggaaacg cagccaaccc cgtttcagcg gtgcgggcaa tggggcgtta
     2281 tggtaaatcg tttgtcagaa gctggtgata tagcaccaga gcaagtacaa cgccagcata
     2341 aaccaaatcc cccacttcag acaccatcgc cagtatctga acagatgctt ctcccgtgta
     2401 tccgcttcat gaatgacgtt ctccaaactg tcatttttca cgatttttct cctcaatatc
     2461 acgtcggaac aacctggacc agaggctgcg ttttttttcc tgctccagat cttcattcag
     2521 tcggctgatt tcggccagca gctgtgtccg ctcctcatcg tgttgccgga gttcggcttc
     2581 gcgagtgctt ttatcctcca acatcaatgt gaccgtctgc tgcagggcag ttaactgctg
     2641 ttgtatctct ttcagttgcg ggtgttcagc tggagtatcg tcaatttctt gctgtccctt
     2701 tttgtgcctt ttgactgtct cctccgtccg cagttcaccg taagcccgaa tcagctcgca
     2761 ggtgtcgaat tctcgccgtc catctttccc tgtacggtaa ctgacaaggc cttttttcat
     2821 gtcccggtac agctgggatc gcgaacgacc ggtcagtttt agtgtgtcct ttacggtgtg
     2881 ccaagccata aaaattaccg tgtctcctgt atgtctcatg ttgagctcgt agattatatt
     2941 tctgttttaa catggcatat ctaaggttgt ccgcaggaag tgaaaaaacc acaaaaaaat
     3001 catgttgacg atgtgctttt ttcgggcgta gtattagatt aactgtatat aaacacattg
     3061 ttatatatgc agtattatgg tatggaagag tacttataac agcacactgc ggaaacggca
     3121 ggcaacaaac cgcacacctg atttctaata aaaataaaac aaaaagggaa aaattatgcc
     3181 tgggtttaat tatggtggta acagtgtagg ggatggtact aattggagtt ctgagcgggg
     3241 ttctgacccc actacgccag ggggcgggga taatggtcat gctggagatc attcttcatc
     3301 tggtagttcg tcatcaactg ttgaacatac cccttgggga gacctgacaa ccgacgctgc
     3361 cggctatgct tatatgaatg gtattaaact gacggcagat aactcgcaac ttgcttacgt
     3421 ttctccaact catcttgtgc gagtacttaa ttctctgctc gatcgttctt acatgaaacc
     3481 cgagccaggt gaacatgccg gtgtgacggg ggtgcctgcg acatccccaa gccgtgtaac
     3541 cctcgcagat aacgcgctga agaatgcaca atcaaaagcc caagatgccg cagctgctct
     3601 gtcgaaagca aatgcggcta ttagtcaggc gcaatcagtt cgtggacggt gcggtttatc
     3661 tattaccccc tctagataaa tgagcaggga caaacttcgc cacccaagat agcacttttt
     3721 ctaccggcat gggggtcgca ataccatagc cttgcgctac atcacaacct aggttcatca
     3781 gcaacacttc gtgctcaacc gtttccaccc cttcagcaat aacctcgcgg ttaaacgatt
     3841 tcgctaggcc gatgatcgcc ttagtcagcc tcaagctgtc tttatcgatg agtatgtcgc
     3901 gtataaaaga tttgtctatc ttgattgact gcgtgggcag ttgtttaagg tagctcagcg
     3961 atgaataccc ggttccaaag tcgtccaacg aaaatgtcac acccagatcc tggcaagcaa
     4021 tgaggcactg agtgacatgt ggtaagtgtt ctatctccac tgattcggta atctcaatat
     4081 ccaacatctg cggcaaaaca ttagggtggc tgtccagcaa aaactttagg gactttacaa
     4141 agttttcttt tttcaaatgt aatgctgcaa tgtttacact cacagaccac gaatgaccca
     4201 agtccgccca ttgttctatt tgactgagcg cctgatctat gacccactcg ccgatctcca
     4261 cgatcagatc gctctgctca atcaacggta taaaatactg cggtaatata agtccatctc
     4321 gcggatgctg ccaacgcaat agtgcttcaa aaccaatcac tgccccactg ctcaaactta
     4381 tttttggttg ataatgcaag cataactcac catcatgtaa cgcttggcga acccgtatta
     4441 cggtatcaaa agctgattta tccatcttat cttttgatac atcaaacaaa tggaaacagt
     4501 tacggccact ttgtttggcc ttatacatag cctgatcggc atgacgtagc agtgtatcgg
     4561 cattctcatt atcgtttgga tagagcgtca caccgatact ggcggaaata ttaatgtcta
     4621 tgccatcgat gatgtagacg gcggaaaggg cagctaaaag cctctgcagg gcgctttcca
     4681 acaccttggg atcccgcaca cccaaaatca gcacgaactc atcgcctcca aaacgggcta
     4741 cggtatcttc gatatgcata ctatgtttca ggcgatcagc caccgccact aacagacgat
     4801 cacccatctc gtggccatag ccgtcgttaa tctgcttaaa cccatcgaga tcaagcacgc
     4861 ccacggcaac cgtgctgggc tggctctttg ctttgacaat agcctgatca agcgctttgg
     4921 acagcaaaaa acgatttgga agacccgtca gctcgtcgtg ctcagcctgc cattgcaagg
     4981 tttccagaaa cttccgcttt tcggtcacat cgaaacgaat ggaaacgtat ttctgcaccc
     5041 gctggctggc ataatcgtac atgggtacaa tggtgctctc tacccaatac aggctgccat
     5101 cctttttacg gttgcaaatt tcacctttcc atacctgccc acgtgaaatt tttttccaca
     5161 tatcaataaa gaactcaggg ggatggtacc ctgagtttag tatgcggtgg ttttgcccaa
     5221 tcaactcctg tgcgctatag ccagaaatat cacagaactg ttcattgaca taggtgatta
     5281 ttccggattt atcggtttcc gagaaaatag ctgccgcatc caccgctgca cggtatcttt
     5341 cactcatata taaacctaat tcaccaaaat agtcataagg tcactacctg ttgaaccgtt
     5401 caaccaacga gttgaaacca cgggatgtac tttcaagttc gcggccacga atcacggcgg
     5461 agttagcatt cttcgctgtt ctctcaaccg ttcccgctac gttattaatc tgccgagcaa
     5521 tatcttcagc gacactagcc tgctcttctg aagcggctgc catttgctgg ctcataccac
     5581 tgatccgttc aacagcatcg cgaatgcctt ggatagcaca ctgcgcctct ataacttgct
     5641 gtacaccgtg gtcggcctcg cgaataccga gtttggcatg ctcacagcct catctgcgcc
     5701 ttttttaagg gtttcaatga cgttttgaat ttgttgagtc tgaatcgtca tagtatcgat
     5761 gattctcgcg gcatgccaag tgaataacgt ccgagatact ggaggtggta cagtttctcc
     5821 aacatccaca gtaacgggcg ttacgctcga cagtggtacg aataggtaac gatccataaa
     5881 tgatctgctt gagatctttt gcgatgagtc gtaatctctt gcactataaa cgaaaaaacc
     5941 acccggcaag gtggtttttc gaaggatcag aaaccggcaa gtttctgaac caggtaacag
     6001 tcttgtgcga gacatgtcac caaatatgtc ctttcagtgt agccgcagtc tggccatcac
     6061 ttcaagtact cttaatacat ctctcgcaca acctgcttac cagtggctgc tgccagtggc
     6121 gttttgtcgt gtctttccgg gttggactca agacgatagt taccggaaaa ggcgcagcag
     6181 tcggactgaa cggggggttc gtgcatacag tccagcttgg agcgaactgc cttcccggaa
     6241 ccgagtgtca ggcgtggaat gagataaacg cggccataac agcggattga caccggtaaa
     6301 ccgaaaggca ggaacaggag agcgcacgag ggagccacca gggggaaacg cctggtatct
     6361 ttaagtcctg tcgggtttcg ccaccactga tttgagcgtc agatttcgtg atgcttgtca
     6421 ggggggcgga gcctatggaa aaacggcttt gccgtggcct tctcgcttcc ctgttaagct
     6481 tcttcctggc atcctccagg aaatttccgc cccgctcgta agccatttcc gctcgccgca
     6541 gccgaacgac cgagcgcagc gagtcagtga gcgaggaagc ggaatatatc ctgtagcgca
     6601 tattctgctg acgcaccggt gccgcctttt ttctcctgcc acatgaagca cttcactgac
     6661 atccgcattc gtgccaacat agtaagccag tatacactcc gctagcgctg cgtgactggt
     6721 tcagggctgc gccccgaaac ccgccaaaag cct
//
