LOCUS       AP018534                5962 bp    DNA     circular BCT 02-JUN-2018
DEFINITION  Clostridiales bacterium Choco116 plasmid pChoco116_1 DNA, complete
            genome.
ACCESSION   AP018534
VERSION     AP018534.1
DBLINK      BioProject: PRJDB6815
            BioSample: SAMD00113751
            Sequence Read Archive: DRR126354, DRR126355
KEYWORDS    .
SOURCE      Clostridiales bacterium Choco116
  ORGANISM  Clostridiales bacterium Choco116
            Bacteria; Bacillota; Clostridia; Eubacteriales.
REFERENCE   1
  AUTHORS   Ito,T., Sekizuka,T., Kishi,N., Yamashita,A. and Kuroda,M.
  TITLE     complete plasmid sequence of Clostridiales bacterium str. Choco116
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5962)
  AUTHORS   Sekizuka,T., Ito,T., Kishi,N., Yamashita,A. and Kuroda,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2018) Contact:Tsuyoshi Sekizuka National Institute
            of Infectious Diseases, Pathogen Genomics Center; 1-23-1 Toyama,
            Shinjuku-ku, Tokyo 162-8640, Japan
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method :: Canu v. 1.4; minimap v. 0.2-r124; racon v. 1.1.0;
            circlator v. 1.5.3; Pilon v. 1.18; SPAdes v. 3.11.1; A5-miseq v.
            20140604
            Genome Coverage       :: 250x
            Sequencing Technology :: Sequel; NextSeq 500
            ##Genome-Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..5962
                     /organism="Clostridiales bacterium Choco116"
                     /mol_type="genomic DNA"
                     /strain="Choco116"
                     /host="Homo sapiens"
                     /culture_collection="JCM:32528"
                     /db_xref="taxon:2109689"
                     /plasmid="pChoco116_1"
                     /geo_loc_name="Japan"
                     /collection_date="2016"
     Typing          4462..5684
                     /name="MOBV"
                     /typing="relaxase"
                     /tool="MOB-suite"
                     /identity="100.0"
                     /coverage="100.0"
                     /evalue="0.0"
ORIGIN
        1 gggggaggtg actttctctt taaggccccg gaggggccgc tctttggctc ccccttttcc
       61 ccctgtgggt ttgcagaatg tatgaaaaga ggtgtaagga atggtggatc agcaagaggc
      121 tttggaacgg cagagagagc tttatcagga aaagaatgag catttggaaa ggtttttgga
      181 gccggtggcg ccgtatgagt tttatcggga gatattcccg gagggttctt tcgagaggaa
      241 gggacatttt gaggacagga agggaaacgg gattgcggtg acggttcaga aagttgaggt
      301 tgataaggcg accgggatcg ccctgcagat cgagggggat ggtaaggcga aacggtgtac
      361 tatcactgac gagctggacg aactgcggga gctacaagac actgatttta cgattatgtc
      421 cccgatttcc tattttggtc tgcggcggtg cggtaaaaat gccaggtatc tttatgcttt
      481 ggtgtttgat ctggacgggg taggtatgcc gcagcttcgg gacacgctgc accagatgaa
      541 caaggatatt ctgccccagg caacctttgt tgtaaacagc gggacggggc ttcacctata
      601 ttatgtgttg aaagagccag tgcctatgta tccgcacaac cagaaatgct tgaaggagct
      661 gaaatattcc cttactcggc agatttggaa ccgatatacc tccacgataa aagaaccgca
      721 aatgcagggc attttgcagg gctttcgggt ggtcggctcc ggctcgaaac tgggacggga
      781 gtaccctgtg agggcgttcc ggcttggcgg gccggtggaa ctggcgcagc tgctcgatta
      841 tattccggac agcaacgggg agaggcagcg gcttgagggg cttatgagaa agagccgcct
      901 gtcgctggat gaagcaaagg agaagtaccc agattggtat gaacggagga tcatcaagaa
      961 ggaacggcgg ggtcgttgga cggtcaagcg tgacctttac gattggtggc tgcaccggat
     1021 tgctgacgaa attcgggtag gccatcgttt ttatggcatt atgacgctgg cgatttatgc
     1081 gaaaaaatgt gggattgacg aagacgagct gcgccgggac gcttttgcgc tgctccagcc
     1141 ctatgatgat atgagcgtgg aggacataaa ccgcttcacg aaagatgatg tggtgtgtgc
     1201 cctggagatg ttcaatgagg actatgtgac atttcccagg gacgatatag cgaagctctc
     1261 tggtcttact atgcctgtca ataagcggaa ttggcgtaag caggaagagc atattcaagt
     1321 gatgaacaca atgaaagcat taaaaaaaca gttaggagag attgtcaatg agggtcgacc
     1381 taaaggcagc ggaacagctc aggtacgggt ttatgagtgg cggcagcagc acccggaagg
     1441 ccgtaaggcc gactgccacc gagaaactgg ccttgatccg aaaactatcc gcaaatggtg
     1501 ggattgtcca ccgccagcgg tgcgctttga agatgggcat ataacggtgc gggtgtcccc
     1561 ttcgcaggag ttgagcgatt ggctcctgga cgcactgcac aatgagggtc aggaataagg
     1621 cccagaaagg cccttgttac gctttagaag tcgttttcag ccctccgagg gtaaatatac
     1681 cggctccctc gctactgcgc ccgtaaagcc gcataaatca aggctttttt gccccctaaa
     1741 tgcgtacata ctgggataga actttagagc gtcgaggaca gggagattgt attgacattg
     1801 taaacaaaaa gctatacaat gaatatgata aaacgggtta taataaaagc ggaaggagtt
     1861 gctattatgg cgaatacaag tatcaatatc cgtatggatg cagatttgaa gcggcagttt
     1921 gaggcgttct gtgctgatat gggaatgacg atgacaacgg cgttcaatgt ttttgcgcgt
     1981 aaggctgtga gggagtatag aatacccttt gaaatcagcg gcgatgtgcc gaacgcggaa
     2041 accgtcgaag caatcaagga agtaaagaga atgaaggcta atccgagcct cggcaagacc
     2101 tattccaatg tcgatcagat gatggaggag ctacttgccg atgtataaca taagaccaac
     2161 cacaaagttt cagaaggatt tgaagcgtgt gaaaaagcgc ggctttgata tttctttgct
     2221 gaccgatatt attaaaaagc tggctgcggg ggagccgttg ccggaaaaga acagggatca
     2281 ccagctttcc ggggactatg cggggtgtcg tgagtgccac attacgccgg attggttgct
     2341 gatctacgaa gtggacgggg acgagctgat tttatatctc acccggacgg gatcgcatag
     2401 cgatttattt taggggaagg aggaaaggtc tatgagctgg gataaagaga ggatcgcgca
     2461 gctgcggctc cccgatccgg cggacgatga tccgcaccct cggctgcttc tggaagggta
     2521 cggcatacat gctgggcagg gatttaccgc cttgtttccc gatggctggc acgagattac
     2581 ccttgaagta gcctgggagc cgacagaccc cgcttgctgg tacatatcca cgccgggatt
     2641 tgagggtgtg tgtccgttgg cctgttcgtg aaggtatgaa aacaatccgg cagatagccg
     2701 acgagatagg cgtatcaaaa caggcggttt ataagcggta caaaggcaag ctgtatacgg
     2761 tttgcgctcc gtatgcgcat acggaacagg gggtcttgta tctatcggag caggctgaaa
     2821 ccctgataaa acaagacttt ttgagagatg gctgccccaa tggatcgcat acggatacgc
     2881 atacggagcg ctccattgga gcggtgccgg agcagtcgca agaggctggt gtggtagcaa
     2941 ttttacaggc caccattgac acgctacaag ggcagctttc tgtaaaggac aagcagattg
     3001 aagaattgaa tgcaaggctg gcagaggtca gctctgcgct ggtggtggca cagcagactg
     3061 cccaggccgc ccaggcactt catgccggaa caattcggca gcagcttact gatggtgaag
     3121 atgatccaaa tcaacagggg cagacggtgg agcagaaaaa aagctggttt tcaaaagttt
     3181 ttggtggcag ataggaaaca aaagtatatt tttttcgtca gtacaagtaa gaaaggcggt
     3241 gtgatacagt gaaaaagatt gttcttgttt tggtggcggc tatggttttg gtattcactg
     3301 gttgtgaaaa aaaagaaact atttctatgc cctttgatgt tgctgatgta aataacattg
     3361 agatgtatcg caatgctgag ccatactccg ccgaaaagca agttatcaca gaaagcgaag
     3421 acatagctga tctttattct ctgttttcgg gactggaggt aagcgataag aaaacggagc
     3481 ctgttgtcgg ggagaccata acgagtttta ggttcaatct ctcagacgat acaagttatg
     3541 agatcatcta ctgtgcggaa gctgtaaagt caggcagact gaaatttccg gcggagaaac
     3601 tggattattt tacatcagcc gatattggag gtcgttggga tagctatcaa tatgagattg
     3661 ttcctgtaag tgagagtgag ctgccggggc agtcagaaaa tccctctgat ccgccgcttg
     3721 aagaaacgca tgaatgggat aaaatcccta tggtaatggt ggatggaaaa ctctactatg
     3781 atacggggaa agaaagcacc ataagtggtc gttgcggggt aatggacggg gaaattactt
     3841 caacggttga tggctctgag ataccgacaa aggataacca atctaatttt gggacaggct
     3901 ttgaatatca atacggggca gacaatacca tagagatttt tatgaacgag aaatggatcg
     3961 tttttgagca aagagaagga gacggaagta aagtccgata tggtgatcgg atggtggatg
     4021 cggaggacct ttccaaagaa acgcttgaat ggctggattg gtataatagc ttgccggaag
     4081 aacagcagtt ggctgtaagt tttgtcccgt cggatttgat tgaagaaacc ggccctgtaa
     4141 aaacagagga cgcagaagtt cctgcacagg aagaagaatt atgcggttat cctcttgcac
     4201 cagaagaagt agagtgacag aagaagttct tagagatggt tgtgaggccg gctcttttag
     4261 cccccggcag ggcgcaaagc actttcatac tgccagcccc aaaggggagg cggtgtgaaa
     4321 gtgcttttgc gttactttct caccagaaag taacaaagag gttgtgacag ccacccaggt
     4381 atggtaaaat agagatagta ggatatagtt ctttttacaa gaaagggccg ggtgatttta
     4441 tagaaacaac catttcggga atgacaggcc gaggaagtat tcggcacaat aacaggagtt
     4501 tttcggcggc gaatgtagac cgcagccggt cggagcagaa tatcactttt tgcaacgatg
     4561 acttgaagca ggtgtaccat gagctttttg atgaagcatt ggctgcctat aacgctaaaa
     4621 agaaaaagac cagggacaaa ataccagact actatgagca tatccggcag agcaaacagg
     4681 agaagctatt tcacgaggcc atcttccaga tcggtaacat ggaggactgt gggtgcggct
     4741 ccccaggagg ggaacgggca gcggcagctc tcaaagaatt tgcagagtcc ttccaggagc
     4801 gcaatcctca tctgcgggta ttcaatatgg tgctgcacat ggatgaagcc acgccccacc
     4861 tccatgtaga ctttgtgccg gtggccactg ggcagagccg ggggctgtcc acgagggttt
     4921 ccatgaagca ggcgttaaag cagcaaggat ttgaaagcct gggccgaaag caaaccgaat
     4981 ggaaagcctg gatggagcgt gagaaggtat ctcttggaga gattgctcag gtacacgatt
     5041 ttgagattat cagcctgggc ggtggtcggc ctcacatgga tttgccagag taccgggcag
     5101 cggcgcagcg ccttgaagct gtccaggaac aggttgcagc agcagaacag gatatagcaa
     5161 ctttggaaaa gcagaaaaaa gcgttgcaag ggaatgtgaa gctcctaaag gcggttgaga
     5221 aggtcaagcc tgatctggag gccatacagc cagaaaagac gctgacagga gctgtgaaag
     5281 gcgttaccgt agaacaggta aaggaactga aggcggcagc aatcagaggt gcggcagcgg
     5341 aacagaaagt gcaagagctg aaggaagaaa atcagcggct tcagcagaaa atcccctcga
     5401 caaaagaaaa gctgaaggag gctcaggaga ggcagcggct tgaaaaccaa aaccgaaagc
     5461 tgctggtaca ggtggagtgc ctggaacaag agttggagca ggagcgcagc ttctcggatc
     5521 ggctcctgga tggggtcagt gcggtgatgg attttctgga tcggcacctg ccagagaagt
     5581 tccgccccct tgtcgaaagg gccagggagc tgttgcctgt gccggaggtg cagcagccag
     5641 agcaggagca ggaacgaggt catacctggg gcggcatgga gctttgataa gatagggaaa
     5701 aactgtattg ataatatatg cctgtccagg ggacttgaaa gcgccatctg gacaggctat
     5761 aataacaaca agaaataggg aaaaaactca ttgataatat atgcccccct atggccttta
     5821 ggccaaggaa aaataataaa aatattctct ctcggatagg gagaaagtcg gaggggaaaa
     5881 tgggggtgag cgacggggtg tgggaatgtg gcaaacctaa aaggttttcc atcatttcca
     5941 tgccccagag cgagggggaa aa
//
